GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for dhaL (dihydroxyacetone:PEP phosphotransferase, subunit L) in glycerol catabolism

Or see other characterized proteins similar to dhaL

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Or cluster curated proteins matching a keyword

Definition of dhaL

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 192-216 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b1199 dihydroxyacetone kinase subunit L (EC 2.7.1.121) from Escherichia coli K-12 substr. MG1655
P76014 dihydroxyacetone kinase subunit L from Escherichia coli (strain K12)
DHAL_ECOLI / P76014 PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL; EC 2.7.1.121 from Escherichia coli (strain K12)
P76014 glycerone kinase (EC 2.7.1.29) from Escherichia coli
CH_000734 PTS-dependent dihydroxyacetone kinase, DhaL subunit; EC 2.7.-.-; EC 2.7.1.- from Escherichia coli K12
PFams: Dak2
210 amino acids: PaperBLAST, CDD, Compare to cluster

DHAL2_LISIN / Q92EU3 PEP-dependent dihydroxyacetone kinase 2, ADP-binding subunit DhaL; EC 2.7.1.121 from Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
PFams: Dak2
216 amino acids: PaperBLAST, CDD, Compare to cluster

DHAL_LACLA / Q9CIV7 PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL; EC 2.7.1.121 from Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
PFams: Dak2
192 amino acids: PaperBLAST, CDD, Compare to cluster