GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glpO (glycerol 3-phosphate oxidase) in glycerol catabolism

Or see other characterized proteins similar to glpO

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of glpO

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 609-609 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q833L7 glycerol-3-phosphate oxidase (EC 1.1.3.21) from Enterococcus faecalis
PFams: DAO, DAO_C
609 amino acids: PaperBLAST, CDD, Compare to cluster

GLPO_ENTCA / O86963 Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus (Enterococcus flavescens)
PFams: FAD_binding_3, DAO, DAO_C
609 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q70GP9 glycerol-3-phosphate oxidase (EC 1.1.3.21) from Mycoplasma mycoides subsp. mycoides
CH_000554 glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides subsp. mycoides SC
PFams: DAO, NAD_binding_8
387 amino acids: PaperBLAST, CDD