GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hutF (N-formiminoglutamate deiminase) in L-histidine catabolism

Or see other characterized proteins similar to hutF

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of hutF

Fetched 11 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 11 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 453-464 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q9HU77 formimidoylglutamate deiminase (EC 3.5.3.13) from Pseudomonas aeruginosa
PFams: Amidohydro_1, Amidohydro_3
453 amino acids: PaperBLAST, CDD, Compare to cluster

Q4KJP1 formiminoglutamate deiminase subunit (EC 3.5.3.13) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
PFams: Amidohydro_1
454 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c36360 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Phaeobacter inhibens BS107
PFams: Amidohydro_1
455 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00673 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Sinorhizobium meliloti 1021
PFams: Amidohydro_1
461 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_01705 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas simiae WCS417
PFams: Amidohydro_1, Amidohydro_3
454 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_2549 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Acidovorax sp. GW101-3H11
PFams: Amidohydro_1
464 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_330 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens GW456-L13
PFams: Amidohydro_1, Amidohydro_3
454 amino acids: PaperBLAST, CDD, Compare to cluster

Pf1N1B4_1591 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N1B4
PFams: Amidohydro_1, Amidohydro_3
454 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_12235 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2E3
PFams: Amidohydro_1, Amidohydro_3
454 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_09645 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2C3
PFams: Amidohydro_1
454 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_3808 Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Pseudomonas fluorescens FW300-N2E2
PFams: Amidohydro_1
454 amino acids: PaperBLAST, CDD, Compare to cluster