Clusters of Characterized Proteins

Clustering the characterized proteins for natA (L-isoleucine ABC transporter, ATPase component 1 (NatA)) in L-isoleucine catabolism

Or see other characterized proteins similar to natA

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Definition of natA

• Ignore hits to Q55164 when looking for 'other' hits (NatA aka BRAF aka SLR0467, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE)
• Curated sequence Q7A2H0: NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
• Comment: Synechocystis sp. NatABCDE; also a similar system in Anabaena (also known as N-I; TC 3.A.1.4.6) is thought to transport isoleucine (PMC4500139). A related system from Synechocystis (TC 3.A.1.4.2) transports a range of amino acids, but it is not clear that isoleucine is a substrate, so that system is marked ignore.

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.4.6 / Q7A2H0 NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 260 amino acids: PaperBLAST, CDD