GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lacC (D-tagatose-6-phosphate kinase) in lactose catabolism

Or see other characterized proteins similar to lacC

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of lacC

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 310-310 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P0A0B8 D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus (strain MW2)
P0A0B9 tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus
PFams: PfkB, Carb_kinase
310 amino acids: PaperBLAST, CDD, Compare to cluster

LACC_LACLL / P23391 Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis subsp. lactis (Streptococcus lactis)
PFams: PfkB
310 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

b1723 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli K-12 substr. MG1655
P06999 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli (strain K12)
PFKB_ECOLI / P06999 ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; 6-phosphofructokinase isozyme II; Phosphohexokinase 2; EC 2.7.1.11 from Escherichia coli (strain K12)
P06999 6-phosphofructokinase (EC 2.7.1.11) from Escherichia coli
PFams: PfkB, Phos_pyr_kin
309 amino acids: PaperBLAST, CDD

b3916 6-phosphofructokinase 1 (EC 2.7.1.11) from Escherichia coli K-12 substr. MG1655
P0A796 6-phosphofructokinase 1 (EC 2.7.1.11) from Escherichia coli (strain K12)
P0A797 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli O157:H7
PFKA_ECOLI / P0A796 ATP-dependent 6-phosphofructokinase isozyme 1; ATP-PFK 1; Phosphofructokinase 1; 6-phosphofructokinase isozyme I; Phosphohexokinase 1; EC 2.7.1.11 from Escherichia coli (strain K12)
CH_024070 6-phosphofructokinase isozyme 1; EC 2.7.1.11 from Escherichia coli K12
PFams: PFK
320 amino acids: PaperBLAST, CDD