Clusters of Characterized Proteins

Clustering the characterized proteins for lacF (lactose ABC transporter, permease component 1) in lactose catabolism

Or see other characterized proteins similar to lacF

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Definition of lacF

• Curated sequence P29823: LacF, component of Lactose porter
• Curated sequence SM_b21653: ABC transporter for Lactose, permease component 1

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 298-298 amino acids (heteromeric)

TC 3.A.1.1.4 / P29823 LacF, component of Lactose porter from Agrobacterium radiobacter
PFams: BPD_transp_1
Heteromeric, 298 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b21653 ABC transporter for Lactose, permease component 1 from Sinorhizobium meliloti 1021
PFams: BPD_transp_1
Heteromeric, 298 amino acids: PaperBLAST, CDD, Compare to cluster