Clusters of Characterized Proteins

Clustering the characterized proteins for lacK (lactose ABC transporter, ATPase component) in lactose catabolism

Or see other characterized proteins similar to lacK

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Definition of lacK

• Curated sequence Q01937: LacK, component of Lactose porter
• Curated sequence SM_b20002: ABC transporter for Lactose, ATPase component

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 358-363 amino acids (heteromeric)

TC 3.A.1.1.4 / Q01937 LacK, component of Lactose porter from Agrobacterium radiobacter
PFams: ABC_tran, OB_MalK, TOBE_2
Heteromeric, 363 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b20002 ABC transporter for Lactose, ATPase component from Sinorhizobium meliloti 1021
PFams: ABC_tran, OB_MalK, TOBE_2
Heteromeric, 358 amino acids: PaperBLAST, CDD, Compare to cluster