Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clustering the characterized proteins for lacL (heteromeric lactase, large subunit) in lactose catabolism

Or see all steps for lactose catabolism

Definition of lacL

Curated sequence A0SWS3: beta-galactosidase (EC 3.2.1.23)
Curated sequence AAA25267.1: β-galactosidase L+M (LacL+LacM) (EC 3.2.1.23)
Curated sequence AAL09167.1: β-galactosidase (LacL+LacM) (EC 3.2.1.23)
Curated sequence ABF72116.1: β-galactosidase (Lreu?gal) (LacL + LacM) (EC 3.2.1.23). beta-galactosidase (EC 3.2.1.23)
Curated sequence ABJ65308.1: LVIS_2259 + LVIS_2258 (EC 3.2.1.23)
Curated sequence ACC38286.1: β-galactosidase large subunit (LacL) (EC 3.2.1.23)
Curated sequence AEG39988.1: β-galactosidase large subunit (LacL;WANG_0293) (EC 3.2.1.23)
Curated sequence AEJ32720.1: β-galactosidase (LacLM;LacL+LacM) (EC 3.2.1.23)
Curated sequence BAA20536.1: β-galactosidase (LacL) (EC 3.2.1.23)
Curated sequence CAA57730.1: β-galactosidase L+S (LacL+LacS) (heterodimer) (EC 3.2.1.23)
Curated sequence CAD65569.1: β-galactosidase (LacL+LacM,lp_3483+lp_3484) (EC 3.2.1.23)
Curated sequence CAZ66936.1: β-galactosidase (LacL+LacM) (EC 3.2.1.23)
Curated sequence Q7WTB4: Beta-galactosidase large subunit; Beta-gal large subunit; Lactase large subunit; EC 3.2.1.23

Fetched 13 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 13 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

The first sequence in each cluster is the seed.

A0SWS3 beta-galactosidase (EC 3.2.1.23) from Lactobacillus acidophilus
PFams: Glyco_hydro_2_N, BetaGal_dom4_5, Glyco_hydro_2, Glyco_hydro_2_C
628 amino acids: PaperBLAST, CDD, Compare to cluster

AAA25267.1 β-galactosidase L+M (LacL+LacM) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
626 amino acids: PaperBLAST, CDD, Compare to cluster

Q19R72 beta-galactosidase (EC 3.2.1.23) from Lactobacillus reuteri
ABF72116.1 β-galactosidase (Lreu?gal) (LacL + LacM) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
628 amino acids: PaperBLAST, CDD, Compare to cluster

AEG39988.1 β-galactosidase large subunit (LacL;WANG_0293) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, BetaGal_dom4_5, Glyco_hydro_2, Glyco_hydro_2_C
628 amino acids: PaperBLAST, CDD, Compare to cluster

AEJ32720.1 β-galactosidase (LacLM;LacL+LacM) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
626 amino acids: PaperBLAST, CDD, Compare to cluster

CAA57730.1 β-galactosidase L+S (LacL+LacS) (heterodimer) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
625 amino acids: PaperBLAST, CDD, Compare to cluster

CAD65569.1 β-galactosidase (LacL+LacM,lp_3483+lp_3484) (EC 3.2.1.23) (see protein)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
626 amino acids: PaperBLAST, CDD, Compare to cluster

BGAL_LACHE / Q7WTB4 Beta-galactosidase large subunit; Beta-gal large subunit; Lactase large subunit; EC 3.2.1.23 from Lactobacillus helveticus (Lactobacillus suntoryeus)
PFams: Glyco_hydro_2_N, Glyco_hydro_2, Glyco_hydro_2_C
Heteromeric, 628 amino acids: PaperBLAST, CDD, Compare to cluster