Clustering the characterized proteins for DAPtransferase (L,L-diaminopimelate aminotransferase) in L-lysine biosynthesis
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Definition of DAPtransferase
Fetched 24 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 24 of these sequences
Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism
A8IW39 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydomonas reinhardtii
PFams: Aminotran_1_2
441 amino acids: PaperBLAST, CDD, Compare to cluster
A0A6P3CW87 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_SYNFM / A0LEA5 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
A0LEA5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans
PFams: Aminotran_1_2
388 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_METTH / O26158 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
O26158 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanothermobacter thermautotrophicus
PFams: Aminotran_1_2, Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster
O66630 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus
PFams: Aminotran_1_2
387 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_CHLTR / O84395 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Chlamydia trachomatis (strain D/UW-3/Cx)
O84395 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydia trachomatis
PFams: Aminotran_1_2
394 amino acids: PaperBLAST, CDD, Compare to cluster
Q2NFU1 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosphaera stadtmanae
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster
Q3MAL4 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_SYNY3 / Q55828 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Synechocystis sp. (strain PCC 6803 / Kazusa)
Q55828 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Synechocystis sp.
PFams: Aminotran_1_2
412 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_BACFN / Q5LC03 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow)
Q5LC03 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Bacteroides fragilis
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_LEPIC / Q72NJ3 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Q72NJ3 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Leptospira interrogans
PFams: Aminotran_1_2
408 amino acids: PaperBLAST, CDD, Compare to cluster
Q74GT3 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Geobacter sulfurreducens
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_GLOVI / Q7NDX4 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q7NDX4 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus
PFams: Aminotran_1_2
392 amino acids: PaperBLAST, CDD, Compare to cluster
Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans
PFams: Aminotran_1_2
389 amino acids: PaperBLAST, CDD, Compare to cluster
Q93ZN9 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
DAPAT_ARATH / Q93ZN9 LL-diaminopimelate aminotransferase, chloroplastic; AtDAP-AT; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; Protein ABERRANT GROWTH AND DEATH 2; EC 2.6.1.83 from Arabidopsis thaliana (Mouse-ear cress)
Q93ZN9 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
PFams: Aminotran_1_2
461 amino acids: PaperBLAST, CDD, Compare to cluster
Q9ZQI7 lysine aminotransferase from Arabidopsis thaliana
ALD1_ARATH / Q9ZQI7 Aminotransferase ALD1, chloroplastic; AGD2-like defense response protein 1; EC 2.6.1.- from Arabidopsis thaliana (Mouse-ear cress)
Q9ZQI7 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
PFams: Aminotran_1_2, Alliinase_C
456 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_ACET2 / A3DK17 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_DESHD / Q18T09 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Desulfitobacterium hafniense (strain DSM 10664 / DCB-2)
Q18T09 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Desulfitobacterium hafniense
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_MOOTA / Q2RK33 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
Q2RK33 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_PARUW / Q6MDE0 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Protochlamydia amoebophila (strain UWE25)
Q6MDE0 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Candidatus Protochlamydia amoebophila
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster
A0A1E7FWR0 L-methionine transaminase (EC 2.6.1.88) (from HMM only) from Fragilariopsis cylindrus CCMP1102
PFams: Aminotran_1_2
418 amino acids: PaperBLAST, CDD, Compare to cluster
Q3MDN5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD, Compare to cluster
Q58786 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
DAPAT_METJA / Q58786 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
PFams: Aminotran_1_2
418 amino acids: PaperBLAST, CDD, Compare to cluster
DAPAT_METMP / Q6LX26 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanococcus maripaludis (strain S2 / LL)
PFams: Aminotran_1_2
416 amino acids: PaperBLAST, CDD, Compare to cluster