Clusters of Characterized Proteins

Clustering the characterized proteins for dapL (N-acetyl-diaminopimelate deacetylase) in L-lysine biosynthesis

Or see other characterized proteins similar to dapL

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Definition of dapL

• Curated proteins or TIGRFams with EC 3.5.1.47
• Predicted: UniProt sequence Q2FH40: RecName: Full=Uncharacterized hydrolase SAUSA300_1291; EC=3.-.-.-;
• Comment: Also known as ykuR or DapeL. The putative amidohydrolase AA076_RS07060 (Q2FH40) from Staphylococcus is conserved near dapX and/or lysA and is similar to N-acetylcysteine deacetylase, so we predict that it is a N-acetyl-diaminopimelate deacetylase.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 374-375 amino acids (not heteromeric)

DAPEL_PRIM1 / D5E0A1 N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium (strain ATCC 12872 / QMB1551) (Bacillus megaterium)
PFams: Peptidase_M20, M20_dimer
375 amino acids: PaperBLAST, CDD, Compare to cluster

O34916 N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis (strain 168)
DAPEL_BACSU / O34916 N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis (strain 168)
PFams: Peptidase_M20, M20_dimer
374 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q2FH40 Uncharacterized hydrolase SAUSA300_1291; EC=3.-.-.-
383 amino acids: PaperBLAST, CDD