Clusters of Characterized Proteins

Steps in L-lysine catabolism

Cluster the charaterized proteins for a step:

• LHT: L-lysine transporter
• Slc7a1: L-lysine transporter Slc7a1
• alr: lysine racemase
• amaA: L-pipecolate oxidase
• amaB: L-2-aminoadipate semialdehyde dehydrogenase (AmaB/Pcd)
• amaD: D-lysine oxidase
• argT: L-lysine ABC transporter, substrate-binding component ArgT
• atoB: acetyl-CoA C-acetyltransferase
• bcd: butanoyl-CoA dehydrogenase (NAD+, ferredoxin), dehydrogenase subunit
• bgtB: L-histidine ABC transporter, fused substrate-binding and permease components (BgtB/BgtAB)
• cadA: lysine decarboxylase
• ctfA: butanoyl-CoA:acetoacetate CoA-transferase, alpha subunit
• ctfB: butanoyl-CoA:acetoacetate CoA-transferase, beta subunit
• davA: 5-aminovaleramidase
• davB: L-lysine 2-monooxygenase
• davD: glutarate semialdehyde dehydrogenase
• davT: 5-aminovalerate aminotransferase
• dpkA: 1-piperideine-2-carboxylate reductase
• ech: (S)-3-hydroxybutanoyl-CoA hydro-lyase
• etfA: butanoyl-CoA dehydrogenase (NAD+, ferredoxin), etfA subunit
• etfB: butanoyl-CoA dehydrogenase (NAD+, ferredoxin), etfB subunit
• fadB: (S)-3-hydroxybutanoyl-CoA dehydrogenase
• gcdG: succinyl-CoA:glutarate CoA-transferase
• gcdH: glutaryl-CoA dehydrogenase
• glaH: glutarate 2-hydroxylase, succinate-releasing (GlaH or CsiD)
• hglS: D-2-hydroxyglutarate synthase
• hisM: L-lysine ABC transporter, permease component 1 (HisM)
• hisP: L-lysine ABC transporter, ATPase component HisP
• hisQ: L-lysine ABC transporter, permease component 2 (HisQ)
• kal: 3-aminobutyryl-CoA deaminase
• kamA: L-lysine 2,3-aminomutase
• kamD: L-beta-lysine 5,6-aminomutase, alpha subunit
• kamE: L-beta-lysine 5,6-aminomutase, beta subunit
• kce: (S)-5-amino-3-oxohexanoate cleavage enzyme
• kdd: 3,5-diaminohexanoate dehydrogenase
• lat: L-lysine 6-aminotransferase
• lhgD: L-2-hydroxyglutarate dehydrogenase or oxidase (LhgD or LhgO)
• lysDH: L-lysine 6-dehydrogenase
• lysL: L-lysine transporter LysL
• lysN: 2-aminoadipate transaminase
• lysP: L-lysine:H+ symporter LysP
• patA: cadaverine aminotransferase
• patD: 5-aminopentanal dehydrogenase
• ydiJ: (R)-2-hydroxyglutarate dehydrogenase

Or see an overview of L-lysine catabolism

Or see all pathways