Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for lysP (L-lysine:H+ symporter LysP) in L-lysine catabolism

Or see other characterized proteins similar to lysP

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of lysP

Curated sequence CH_003129: lysine-specific permease. Lysine:H+ symporter. Forms a stable complex with CadC to allow lysine-dependent adaptation to acidic stress (Rauschmeier et al. 2013). The Salmonella orthologue is 95% identical to the E. coli protein and is highly specific for Lysine. Residues involved in lysine binding have been identified. lysine:H⁺ symporter. lysine:H⁺ symporter
Curated sequence CH_091040: lysine-specific permease. Lysine-specific permease. Lysine permease of 611 aas and 13 putative TMSs, Lyp1
Curated sequence CH_091257: S-adenosylmethionine permease SAM3. S-adenosylmethionine permease SAM3; S-adenosylmethionine metabolism protein 3. S-adenosylmethionine uptake permease, SAM3 (also takes up polyamines, glutamate, lysine and the toxic S-adenosylmethionine analogue sinefungin)
Curated sequence CH_091412: uncharacterized amino-acid permease C869.11. The basic amino acid (canavanine sensitivity) transporter, Cat1
Curated sequence A0A1D8PPG4: Probable lysine/arginine permease CAN3; Basic amino acids permease CAN3
Curated sequence A0A1D8PPI5: Lysine/arginine permease CAN1; Basic amino acids permease CAN1
Curated sequence A2RNZ6: Lysine permease LysP
Curated sequence Q59WU0: Probable lysine/arginine permease CAN2; Basic amino acids permease CAN2
Curated sequence K7VV21: The lysine specific transporter, LysP of 488 aas and 12 TMSs
Curated sequence P43059: The high affinity basic amino acid (Arg, Lys, His) transporter, Can1

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 10 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 488-611 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b2156 lysine:H⁺ symporter from Escherichia coli K-12 substr. MG1655
P25737 lysine:H⁺ symporter from Escherichia coli (strain K12)
TC 2.A.3.1.2 / P25737 Lysine:H+ symporter. Forms a stable complex with CadC to allow lysine-dependent adaptation to acidic stress (Rauschmeier et al. 2013). The Salmonella orthologue is 95% identical to the E. coli protein and is highly specific for Lysine. Residues involved in lysine binding have been identified from Escherichia coli
CH_003129 lysine-specific permease from Escherichia coli K12
PFams: AA_permease_2, AA_permease
489 amino acids: PaperBLAST, CDD, Compare to cluster

LYP1_YEAST / P32487 Lysine-specific permease from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
TC 2.A.3.10.10 / P32487 Lysine permease of 611 aas and 13 putative TMSs, Lyp1 from Saccharomyces cerevisiae (Baker's yeast)
GI|1302328 lysine-specific permease from Saccharomyces cerevisiae
PFams: AA_permease, AA_permease_2
611 amino acids: PaperBLAST, CDD, Compare to cluster

SAM3_YEAST / Q08986 S-adenosylmethionine permease SAM3; S-adenosylmethionine metabolism protein 3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
TC 2.A.3.10.15 / Q08986 S-adenosylmethionine uptake permease, SAM3 (also takes up polyamines, glutamate, lysine and the toxic S-adenosylmethionine analogue sinefungin) from Saccharomyces cerevisiae (Baker's yeast)
RF|NP_015049.1 S-adenosylmethionine permease SAM3 from Saccharomyces cerevisiae
PFams: AA_permease_2, AA_permease
587 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.3.10.21 / Q9URZ4 The basic amino acid (canavanine sensitivity) transporter, Cat1 from Schizosaccharomyces pombe (Fission yeast)
RF|NP_595008.2 uncharacterized amino-acid permease C869.11 from Schizosaccharomyces pombe
PFams: AA_permease, AA_permease_2
580 amino acids: PaperBLAST, CDD, Compare to cluster

CAN3_CANAL / A0A1D8PPG4 Probable lysine/arginine permease CAN3; Basic amino acids permease CAN3 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
PFams: AA_permease_2, AA_permease
566 amino acids: PaperBLAST, CDD, Compare to cluster

CAN1_CANAL / A0A1D8PPI5 Lysine/arginine permease CAN1; Basic amino acids permease CAN1 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
PFams: AA_permease, AA_permease_2
571 amino acids: PaperBLAST, CDD, Compare to cluster

LYSP_LACLM / A2RNZ6 Lysine permease LysP from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: AA_permease, AA_permease_2
508 amino acids: PaperBLAST, CDD, Compare to cluster

CAN2_CANAL / Q59WU0 Probable lysine/arginine permease CAN2; Basic amino acids permease CAN2 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
PFams: AA_permease, AA_permease_2
568 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.3.1.18 / K7VV21 The lysine specific transporter, LysP of 488 aas and 12 TMSs from Lactococcus lactis subsp. cremoris UC509.9
PFams: AA_permease, AA_permease_2
488 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.3.10.20 / P43059 The high affinity basic amino acid (Arg, Lys, His) transporter, Can1 from Candida albicans (Yeast)
PFams: AA_permease, AA_permease_2
571 amino acids: PaperBLAST, CDD, Compare to cluster