Clusters of Characterized Proteins

Clustering the characterized proteins for PS417_11885 (myo-inositol ABC transporter, substrate-binding component) in myo-inositol catabolism

Or see other characterized proteins similar to PS417_11885

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Definition of PS417_11885

• Curated sequence GFF2331: Inositol transport system sugar-binding protein
• UniProt sequence A0A0N9WNI6: SubName: Full=Rhizopine-binding protein {ECO:0000313|EMBL:ALI03491.1};
• Comment: The ortholog in P. fluorescens FW300-N2E3 (AO353_21380, A0A0N9WNI6) was not reannotated but does have the phenotype

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 308-309 amino acids (not heteromeric)

A0A0N9WNI6 Rhizopine-binding protein
308 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_11885 Inositol transport system sugar-binding protein from Pseudomonas simiae WCS417
PFams: Peripla_BP_4, Peripla_BP_1
309 amino acids: PaperBLAST, CDD, Compare to cluster