Clusters of Characterized Proteins

Clustering the characterized proteins for PS417_11895 (myo-inositol ABC transporter, permease component) in myo-inositol catabolism

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Definition of PS417_11895

• Curated sequence GFF2333: Inositol transport system permease protein
• Curated sequence AO353_21390: m-Inositol ABC transporter, permease component (iatP)

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 340-340 amino acids (1/2 heteromeric)

PS417_11895 Inositol transport system permease protein from Pseudomonas simiae WCS417
PFams: BPD_transp_2
340 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_21390 m-Inositol ABC transporter, permease component (iatP) from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_2
Heteromeric, 340 amino acids: PaperBLAST, CDD, Compare to cluster