GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aro-dehydratase (arogenate dehydratase) in L-phenylalanine biosynthesis

Or see other characterized proteins similar to aro-dehydratase

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Definition of aro-dehydratase

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 392-434 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

AROD3_ARATH / Q9ZUY3 Arogenate dehydratase 3, chloroplastic; AtADT3; Prephenate dehydratase 1; AtPDT1; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
Q9ZUY3 prephenate dehydratase (EC 4.2.1.51); arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

AROD4_ARATH / O22241 Arogenate dehydratase 4, chloroplastic; AtADT4; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
O22241 arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

AROD5_ARATH / Q9FNJ8 Arogenate dehydratase 5, chloroplastic; AtADT5; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
Q9FNJ8 arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
425 amino acids: PaperBLAST, CDD, Compare to cluster

AROD1_ARATH / Q9SA96 Arogenate dehydratase/prephenate dehydratase 1, chloroplastic; AtADT1; AtPDT1; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
Q9SA96 arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
392 amino acids: PaperBLAST, CDD, Compare to cluster

AROD6_ARATH / Q9SGD6 Arogenate dehydratase/prephenate dehydratase 6, chloroplastic; AtADT6; AtPDT6; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
Q9SGD6 arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
413 amino acids: PaperBLAST, CDD, Compare to cluster

AROD1_PETHY / D3U715 Arogenate dehydratase 1; PhADT1; EC 4.2.1.91 from Petunia hybrida (Petunia)
D3U715 arogenate dehydratase (EC 4.2.1.91) from Petunia x hybrida
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

AROD2_PETHY / D3U716 Arogenate dehydratase 2; PhADT2; Prephenate dehydratase ADT3; EC 4.2.1.91; EC 4.2.1.51 from Petunia hybrida (Petunia)
D3U716 arogenate dehydratase (EC 4.2.1.91) from Petunia x hybrida
PFams: PDT
394 amino acids: PaperBLAST, CDD, Compare to cluster

AROD3_PETHY / D3U717 Arogenate dehydratase 3; PhADT3; Prephenate dehydratase ADT3; EC 4.2.1.91; EC 4.2.1.51 from Petunia hybrida (Petunia)
D3U717 arogenate dehydratase (EC 4.2.1.91) from Petunia x hybrida
PFams: PDT
434 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

PHEC_PSEAE / Q01269 Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q01269 arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa
PFams: SBP_bac_3
268 amino acids: PaperBLAST, CDD

AROD2_ARATH / Q9SSE7 Arogenate dehydratase/prephenate dehydratase 2, chloroplastic; AtADT2; AtPDT2; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana (Mouse-ear cress)
Q9SSE7 arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana
PFams: PDT
381 amino acids: PaperBLAST, CDD
(similar to BRENDA::Q9SA96 from Cluster 1, but similarity to seed sequence is below thresholds)