Clusters of Characterized Proteins

GapMind for Amino acid biosynthesis

Clusters of Characterized Proteins

Clustering the characterized proteins for ptransferase (prephenate aminotransferase) in L-phenylalanine biosynthesis

Or see other characterized proteins similar to ptransferase

Or see all steps for L-phenylalanine biosynthesis

Or cluster curated proteins matching a keyword

Definition of ptransferase

Curated proteins or TIGRFams with EC 2.6.1.79
Curated proteins or TIGRFams with EC 2.6.1.78
Ignore hits to items matching EC 2.6.1.5 when looking for 'other' hits
Ignore hits to items matching EC 2.6.1.27 when looking for 'other' hits
Ignore hits to items matching EC 2.6.1.57 when looking for 'other' hits
Ignore hits to items matching EC 2.6.1.1 when looking for 'other' hits
Ignore hits to O50434 when looking for 'other' hits (Probable aminotransferase Rv1178; EC 2.6.1.-)
Comment: This enzyme forms arogenate, also known as pretyrosine. Similarity to O50434 is ignored because it is not acutally characterized.

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 385-479 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

AAPAT_RHIME / Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Q02635 aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_THET8 / Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q56232 aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus
RF|YP_143312.1 aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus HB8
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
385 amino acids: PaperBLAST, CDD, Compare to cluster

PAT_ARATH / Q9SIE1 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana (Mouse-ear cress)
Q9SIE1 aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
475 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_CERS1 / A3PMF8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) (Rhodobacter sphaeroides)
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster

PAT_PETHY / E9L7A5 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida (Petunia)
PFams: Aminotran_1_2
479 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_NITEU / Q82WA8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
397 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_CHLTE / Q8KDS8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) (Chlorobium tepidum)
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

P54691 branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.
PFams: Aminotran_4
305 amino acids: PaperBLAST, CDD

Q82IK5 succinyldiaminopimelate transaminase (EC 2.6.1.17); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Streptomyces avermitilis
PFams: Aminotran_1_2
364 amino acids: PaperBLAST, CDD