Clusters of Characterized Proteins

Clustering the characterized proteins for padB (phenylacetyl-CoA dehydrogenase, PadB subunit) in phenylacetate catabolism

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Definition of padB

• UniProt sequence A0A2R4BLL6: SubName: Full=Phenylacetyl-CoA:acceptor oxidoreductase large subunit PadB {ECO:0000313|EMBL:AVR88225.1}; EC=1.8.5.3 {ECO:0000313|EMBL:AVR88225.1};
• Comment: phenylacetyl-CoA oxidoreductase has three subunits, padBCD. The system from Thauera aromatica includes 93 kDa protein: TTPNxPtGVtKVAtY = padB = Tharo_1297 = A0A2R4BLL6; 27 kDa protein: TRYAMVADLRRxVGxQTxTAAxKHTNATPP = padC = Tharo_1296 = A0A2R4BLY8; 26 kDa protein: kRGVQPELQPFtDAr = padD = Tharo_1295 = A0A2R4BLZ0 (see N-terminal sequences in PMID:10336636). TCDB 5.A.3.11.1 / Q5P037 describes a related system, not the system from T. aromatica, and I'm not sure if those sequences are actually characterized.

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/1 heteromeric)

A0A2R4BLL6 Phenylacetyl-CoA:acceptor oxidoreductase large subunit PadB; EC=1.8.5.3
914 amino acids: PaperBLAST, CDD