GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for dch (cyclohexa-1,5-diene-1-carboxyl-CoA hydratase) in L-phenylalanine catabolism

Or see other characterized proteins similar to dch

Or see all steps for L-phenylalanine catabolism

Or cluster curated proteins matching a keyword

Definition of dch

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 252-258 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

D3RXI0 cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Ferroglobus placidus
PFams: ECH_1, ECH_2
252 amino acids: PaperBLAST, CDD, Compare to cluster

O87873 cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100) from Thauera aromatica
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD, Compare to cluster

Q2LXU6 cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC 4.2.1.100) from Syntrophus aciditrophicus (strain SB)
PFams: ECH_1, ECH_2
256 amino acids: PaperBLAST, CDD, Compare to cluster