Clusters of Characterized Proteins

Clustering the characterized proteins for lysW (2-aminoadipate/glutamate carrier protein) in L-proline biosynthesis

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Definition of lysW

• Curated proteins matching alpha-aminoadipate%carrier
• UniProt sequence Q5JFV9: SubName: Full=Probable lysine biosynthesis protein {ECO:0000313|EMBL:BAD84468.1};
• Comment: LysW is a carrier protein for intermediates in lysine and/or ornithine biosynthesis. It is sometimes called the amino group carrier protein. TK0279 (Q5JFV9) from Thermococcus kodakarensis was characterized, see PMC5076833.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 53-56 amino acids (not heteromeric)

LYSW_SULAC / Q4JAQ0 Alpha-aminoadipate/glutamate carrier protein LysW; AAA carrier protein LysW from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: LysW-like_globular
56 amino acids: PaperBLAST, CDD, Compare to cluster

LYSW_THET8 / Q5SH22 Alpha-aminoadipate carrier protein LysW; AAA carrier protein LysW from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
PFams: LysW-like_globular, TF_Zn_Ribbon
54 amino acids: PaperBLAST, CDD, Compare to cluster

LYSW_SULTO / Q976J8 Alpha-aminoadipate/glutamate carrier protein LysW; AAA carrier protein LysW from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii)
PFams: LysW-like_globular
56 amino acids: PaperBLAST, CDD, Compare to cluster

LYSW_SACS2 / Q980W8 Alpha-aminoadipate/glutamate carrier protein LysW; AAA carrier protein LysW from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
PFams: LysW-like_globular
56 amino acids: PaperBLAST, CDD, Compare to cluster

Q5JFV9 Probable lysine biosynthesis protein
53 amino acids: PaperBLAST, CDD, Compare to cluster