Clusters of Characterized Proteins

Clustering the characterized proteins for aapM (ABC transporter for amino acids (Asp/Asn/Glu/Pro/Leu), permease component 2 (AapM)) in L-proline catabolism

Or see other characterized proteins similar to aapM

Or see all steps for L-proline catabolism

Or cluster curated proteins matching a keyword

Definition of aapM

• Curated sequence Q52814: AapM, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux)
• Ignore hits to SMc02120 when looking for 'other' hits (ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2)

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.3.8 / Q52814 AapM, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux) from Rhizobium leguminosarum (biovar viciae)
PFams: BPD_transp_1
Heteromeric, 384 amino acids: PaperBLAST, CDD