Clusters of Characterized Proteins

Clustering the characterized proteins for natA (proline ABC transporter, ATPase component 1 (NatA)) in L-proline catabolism

Or see other characterized proteins similar to natA

Or see all steps for L-proline catabolism

Or cluster curated proteins matching a keyword

Definition of natA

• Curated sequence Q55164: NatA aka BRAF aka SLR0467, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
• Curated sequence Q7A2H0: NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
• Comment: Synechocystis sp. NatABCDE; also a similar system in Anabaena

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 260-267 amino acids (heteromeric)

TC 3.A.1.4.2 / Q55164 NatA aka BRAF aka SLR0467, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 267 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.4.6 / Q7A2H0 NatA, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 260 amino acids: PaperBLAST, CDD, Compare to cluster