Clusters of Characterized Proteins

Clustering the characterized proteins for mtlF (ABC transporter for polyols MtlEFGK, permease component MtlF) in D-sorbitol (glucitol) catabolism

Or see other characterized proteins similar to mtlF

Or see all steps for D-sorbitol (glucitol) catabolism

Or cluster curated proteins matching a keyword

Definition of mtlF

• Curated sequence O30492: MtlF, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK
• Curated sequence BPHYT_RS16110: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence GFF1304: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence GFF2492: ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 2
• Curated sequence Ac3H11_2943: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence AO356_00020: ABC transporter for D-Sorbitol, permease component 2
• Curated sequence Pf6N2E2_1962: ABC transporter for D-sorbitol, permease component 1
• Curated sequence O30832: SmoF, component of Hexitol (glucitol; mannitol) porter
• Ignore hits to AO353_25885 when looking for 'other' hits (ABC transporter for D-mannitol and D-mannose, permease component 1)
• Ignore hits to PfGW456L13_3041 when looking for 'other' hits (ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 2)

Fetched 8 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 8 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 280-316 amino acids (heteromeric)

TC 3.A.1.1.49 / O30492 MtlF, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK from Pseudomonas fluorescens
PFams: BPD_transp_1
Heteromeric, 296 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.1.5 / O30832 SmoF, component of Hexitol (glucitol; mannitol) porter from Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
PFams: BPD_transp_1
Heteromeric, 290 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS16110 ABC transporter for D-Sorbitol, permease component 2 from Burkholderia phytofirmans PsJN
PFams: BPD_transp_1
Heteromeric, 311 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c13200 ABC transporter for D-Sorbitol, permease component 2 from Phaeobacter inhibens BS107
PFams: BPD_transp_1
Heteromeric, 288 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_12710 ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 2 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 297 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_2943 ABC transporter for D-Sorbitol, permease component 2 from Acidovorax sp. GW101-3H11
PFams: BPD_transp_1
Heteromeric, 316 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_00020 ABC transporter for D-Sorbitol, permease component 2 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 308 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_1962 ABC transporter for D-sorbitol, permease component 1 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 280 amino acids: PaperBLAST, CDD, Compare to cluster