Clusters of Characterized Proteins

Clustering the characterized proteins for aglE (sucrose ABC transporter, substrate-binding component AglK) in sucrose catabolism

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Definition of aglE

• Curated sequence Q9Z3R5: AglE aka R00695 aka SMC03061, component of Sucrose/maltose/trehalose porter (sucrose-inducible). ABC transporter for D-Maltose and D-Trehalose, ATPase component
• UniProt sequence A8LLL6: SubName: Full=Putative bacterial solute-binding protein 1 family {ECO:0000313|EMBL:ABV93394.1};
• Comment: AglEFGK in Sinorhizobium meliloti. A similar system from Dinoroseobacter shibae, Dshi_1652:Dshi_1648, is involved in sucrose uptake. Dinoroseobacter shibae aglE = Dshi_1652 = A8LLL6.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 452-458 amino acids (1/2 heteromeric)

SMc03061 ABC transporter for D-Maltose and D-Trehalose, ATPase component from Sinorhizobium meliloti 1021
TC 3.A.1.1.8 / Q9Z3R5 AglE aka R00695 aka SMC03061, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: SBP_bac_1
Heteromeric, 458 amino acids: PaperBLAST, CDD, Compare to cluster

A8LLL6 Putative bacterial solute-binding protein 1 family
452 amino acids: PaperBLAST, CDD, Compare to cluster