Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for scrB (sucrose-6-phosphate hydrolase) in sucrose catabolism

Or see other characterized proteins similar to scrB

Or see all steps for sucrose catabolism

Or cluster curated proteins matching a keyword

Definition of scrB

Curated sequence CAG25843.1: sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26)
Curated sequence S68598: sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26)
Curated sequence P27217: Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26. invertase (ScrB) (EC 3.2.1.26). sucrose-6-phosphate hydrolase
Curated sequence Q09122: Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26
Ignore hits to items matching 3.2.1.26 when looking for 'other' hits
Ignore hits to AO356_28590 when looking for 'other' hits (Sucrose-6-phosphate hydrolase (EC 3.2.1.B3))
Comment: This reaction does not match an EC number. Many invertases (EC 3.2.1.26) also have this activity, so ignore similarity to those. And the original reannotation of AO356_28590 as sucrose-6-phosphate hydrolase is questionable.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 466-479 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

CAG25843.1 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
469 amino acids: PaperBLAST, CDD, Compare to cluster

S68598 sucrose-6-phosphate hydrolase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
479 amino acids: PaperBLAST, CDD, Compare to cluster

P27217 sucrose-6-phosphate hydrolase from Klebsiella pneumoniae
SCRB_KLEPN / P27217 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Klebsiella pneumoniae
CAA40659.1 invertase (ScrB) (EC 3.2.1.26) (see protein)
PFams: Glyco_hydro_32N, Glyco_hydro_32C
466 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

SCRB_FUSMR / Q09122 Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Fusobacterium mortiferum
33 amino acids: PaperBLAST, CDD