Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for scrP (sucrose phosphorylase) in sucrose catabolism

Or see other characterized proteins similar to scrP

Or see all steps for sucrose catabolism

Or cluster curated proteins matching a keyword

Definition of scrP

Curated proteins or TIGRFams with EC 2.4.1.7
Ignore hits to AAC74391.2 when looking for 'other' hits (sucrose phosphorylase (YcjM) (EC 2.4.1.7). Glucosylglycerate phosphorylase; GGa phosphorylase; GGaP; EC 2.4.1.352. glucosylglycerate phosphorylase (EC 2.4.1.352). glucosylglycerate phosphorylase (EC 2.4.1.352))
Comment: glucosylglycerate phosphorylase (ycjM or b1309 or AAC74391.2) is misannotated as sucrose phosphorylase in CAZy

Fetched 18 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 18 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 480-508 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

B8Y3Y0 sucrose phosphorylase (EC 2.4.1.7) from uncultured bacterium
PFams: Alpha-amylase
493 amino acids: PaperBLAST, CDD, Compare to cluster

2207198A sucrose phosphorylase (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
490 amino acids: PaperBLAST, CDD, Compare to cluster

AAD40317.1 sucrose phosphorylase (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
497 amino acids: PaperBLAST, CDD, Compare to cluster

AAN24362.1 sucrose phosphorylase (Spl;BL0536) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase, DUF1964
508 amino acids: PaperBLAST, CDD, Compare to cluster

AAN58596.1 sucrose phosphorylase (GtfA;SMU.881) (EC 2.4.1.7) (see protein)
CH_008519 sucrose phosphorylase; EC 2.4.1.7 from Streptococcus mutans
PFams: Alpha-amylase
481 amino acids: PaperBLAST, CDD, Compare to cluster

AAO21868.1 sucrose phosphorylase (LaSP;GtfA2;LBA1437) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
480 amino acids: PaperBLAST, CDD, Compare to cluster

SUCP_BIFAA / A0ZZH6 Sucrose phosphorylase; SP; SPase; EC 2.4.1.7 from Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)
AAO33821.1 sucrose phosphorylase (SucP;SP;BaSP) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase, DUF1964
504 amino acids: PaperBLAST, CDD, Compare to cluster

Q84BY1 sucrose phosphorylase (EC 2.4.1.7) from Bifidobacterium longum
AAO84039.1 sucrose phosphorylase (SplP) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase, DUF1964
508 amino acids: PaperBLAST, CDD, Compare to cluster

AAX33736.1 sucrose phosphorylase (LmSP1) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
492 amino acids: PaperBLAST, CDD, Compare to cluster

ABS59292.1 sucrose phosphorylase (742sp) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
485 amino acids: PaperBLAST, CDD, Compare to cluster

M9ZS93 sucrose phosphorylase (EC 2.4.1.7) from Lactobacillus reuteri
AGK37834.1 sucrose phosphorylase (ScrP) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
485 amino acids: PaperBLAST, CDD, Compare to cluster

Q59495 sucrose phosphorylase (EC 2.4.1.7) from Leuconostoc mesenteroides
BAA14344.1 sucrose phosphorylase (LmSPase) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
490 amino acids: PaperBLAST, CDD, Compare to cluster

BAF62433.1 sucrose phosphorylase (Spl) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase, DUF1964
508 amino acids: PaperBLAST, CDD, Compare to cluster

CAA30846.1 sucrose phosphorylase (GftA;SmSP) (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
487 amino acids: PaperBLAST, CDD, Compare to cluster

CAA80424.1 sucrose phosphorylase (EC 2.4.1.7) (see protein)
PFams: Alpha-amylase
488 amino acids: PaperBLAST, CDD, Compare to cluster

GI|22550283 sucrose phosphorylase; EC 2.4.1.7 from Bifidobacterium animalis subsp. lactis
PFams: Alpha-amylase, DUF1964
506 amino acids: PaperBLAST, CDD, Compare to cluster

D9TT09 sucrose 6^F-phosphate phosphorylase (EC 2.4.1.329) (from HMM only) from Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814)
SUCPP_THETC / D9TT09 Sucrose 6(F)-phosphate phosphorylase; Sucrose 6'-phosphate phosphorylase; SPP; EC 2.4.1.329 from Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum)
D9TT09 sucrose 6F-phosphate phosphorylase (EC 2.4.1.329) from Thermoanaerobacterium thermosaccharolyticum
ADL69407.1 6?-P-sucrose phosphorylase (SPP;TtSPP;Tthe_1921) (EC 2.4.1.-) (see protein)
PFams: Alpha-amylase
488 amino acids: PaperBLAST, CDD, Compare to cluster

E4PMA5 glucosylglycerol phosphorylase (configuration-retaining) (EC 2.4.1.359) (from HMM only) from Marinobacter adhaerens (strain DSM 23420 / HP15)
GGOP_MARAH / E4PMA5 Glucosylglycerol phosphorylase; GGoP; 2-O-alpha-D-glucopyranosylglycerol:phosphate alpha-D-glucosyltransferase; 2-O-alpha-D-glucosylglycerol phosphorylase (retaining); EC 2.4.1.- from Marinobacter adhaerens (strain DSM 23420 / HP15)
PFams: Alpha-amylase
480 amino acids: PaperBLAST, CDD, Compare to cluster