Clusters of Characterized Proteins

Clustering the characterized proteins for lutA (L-lactate dehydrogenase, LutA subunit) in L-threonine catabolism

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Definition of lutA

• Curated sequence O07020: Lactate utilization protein A
• Curated sequence Q81GA5: Lactate utilization protein A
• UniProt sequence A0A0C4YIN5: SubName: Full=Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE {ECO:0000313|EMBL:AJG21694.1};
• UniProt sequence E4PLR5: SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADP99852.1};
• Comment: A three-component L-lactate dehydrogenase LutABC was described in Bacillus subtilis (PMC3347220, PMC2668416). Although LutABC does not seem to have been studied biochemically, it is required for L-lactate utilization, and induced during growth on L-lactate, and is distantly related to lldEFG. The related system from B. cereus has also been studied. Based on fitness data, similar systems were identified in Cupriavidus basilensis FW507-4G11 (lutA = RR42_RS21295; lutB = RR42_RS21285; lutC = RR42_RS21290) and Marinobacter adhaerens HP15 (lutA = HP15_4088, lutB = HP15_4089, lutC = HP15_4090).

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 238-279 amino acids (not heteromeric)

LUTA_BACSU / O07020 Lactate utilization protein A from Bacillus subtilis (strain 168)
PFams: CCG, CCG
238 amino acids: PaperBLAST, CDD, Compare to cluster

LUTA_BACCR / Q81GA5 Lactate utilization protein A from Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
PFams: CCG, CCG
239 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0C4YIN5 Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE
262 amino acids: PaperBLAST, CDD, Compare to cluster

E4PLR5 Uncharacterized protein
279 amino acids: PaperBLAST, CDD, Compare to cluster