Clusters of Characterized Proteins

Clustering the characterized proteins for lutB (L-lactate dehydrogenase, LutB subunit) in L-threonine catabolism

Or see other characterized proteins similar to lutB

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Definition of lutB

• Curated sequence O07021: Lactate utilization protein B
• Curated sequence Q81GA4: Lactate utilization protein B
• UniProt sequence A0A0C4Y8G6: SubName: Full=Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF {ECO:0000313|EMBL:AJG21692.1};
• UniProt sequence E4PLR6: SubName: Full=Iron-sulfur cluster binding protein {ECO:0000313|EMBL:ADP99853.1};

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 473-489 amino acids (not heteromeric)

LUTB_BACSU / O07021 Lactate utilization protein B from Bacillus subtilis (strain 168)
PFams: LUD_dom, Fer4_8, DUF3390
479 amino acids: PaperBLAST, CDD, Compare to cluster

LUTB_BACCR / Q81GA4 Lactate utilization protein B from Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
PFams: LUD_dom, Fer4_8, Fer4_17, DUF3390
473 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0C4Y8G6 Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF
489 amino acids: PaperBLAST, CDD, Compare to cluster

E4PLR6 Iron-sulfur cluster binding protein
483 amino acids: PaperBLAST, CDD, Compare to cluster