GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for treC (trehalose-6-phosphate hydrolase) in trehalose catabolism

Or see other characterized proteins similar to treC

Or see all steps for trehalose catabolism

Or cluster curated proteins matching a keyword

Definition of treC

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 542-563 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b4239 trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli K-12 substr. MG1655
P28904 trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli (strain K12)
TREC_ECOLI / P28904 Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli (strain K12)
AAC77196.1 trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, DUF3459
551 amino acids: PaperBLAST, CDD, Compare to cluster

AAF71997.1 α-glucosidase (EC 3.2.1.20) (from HMM only) (see protein)
PFams: Alpha-amylase, Malt_amylase_C
562 amino acids: PaperBLAST, CDD, Compare to cluster

AAG31032.1 trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, DUF3459, Malt_amylase_C
548 amino acids: PaperBLAST, CDD, Compare to cluster

AAN06917.1 trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, Malt_amylase_C
563 amino acids: PaperBLAST, CDD, Compare to cluster

AAU39732.1 trehalose-6-P hydrolase (TreA;BlTreA;BLi00797;BL03069) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, hDGE_amylase, Malt_amylase_C
562 amino acids: PaperBLAST, CDD, Compare to cluster

AAV42863.1 LBA1014 (TreC;La1014) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, hDGE_amylase
554 amino acids: PaperBLAST, CDD, Compare to cluster

ABF38825.1 MGAS10750_Spy1875 (DexS) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, DUF3459
542 amino acids: PaperBLAST, CDD, Compare to cluster

BAB38639.1 trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, DUF3459
551 amino acids: PaperBLAST, CDD, Compare to cluster

BAG86620.1 trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, DUF3459
551 amino acids: PaperBLAST, CDD, Compare to cluster

P39795 trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis (strain 168)
TREC_BACSU / P39795 Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis (strain 168)
CAB12610.1 trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93) (see protein)
PFams: Alpha-amylase, Malt_amylase_C
561 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae WCS417
PFams: Alpha-amylase, DUF3459, Malt_amylase_C
548 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens FW300-N2E3
PFams: Alpha-amylase, DUF3459, Malt_amylase_C
549 amino acids: PaperBLAST, CDD, Compare to cluster