GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for antA (anthranilate 1,2-dioxygenase (deaminating, decarboxylating), large subunit AntA) in L-tryptophan catabolism

Or see other characterized proteins similar to antA

Or see all steps for L-tryptophan catabolism

Or cluster curated proteins matching a keyword

Definition of antA

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 461-471 amino acids (1/4 heteromeric)

The first sequence in each cluster is the seed.

ANTDA_ACIAD / O85673 Anthranilate 1,2-dioxygenase large subunit; EC 1.14.12.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
RF|YP_047246.1 anthranilate 1,2-dioxygenase, large subunit; EC 1.14.12.1 from Acinetobacter sp. ADP1
PFams: Rieske, Ring_hydroxyl_A
471 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_23685 anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC: 1.14.12.1] from Pseudomonas simiae WCS417
PFams: Rieske, Ring_hydroxyl_A
Heteromeric, 463 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_2740 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) from Pseudomonas fluorescens GW456-L13
PFams: Rieske, Ring_hydroxyl_A
461 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_05950 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) from Pseudomonas fluorescens FW300-N2E3
PFams: Rieske, Ring_hydroxyl_A
462 amino acids: PaperBLAST, CDD, Compare to cluster