GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for antB (anthranilate 1,2-dioxygenase (deaminating, decarboxylating), small subunit AntB) in L-tryptophan catabolism

Or see other characterized proteins similar to antB

Or see all steps for L-tryptophan catabolism

Or cluster curated proteins matching a keyword

Definition of antB

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 162-163 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

ANTDB_ACIAD / O85674 Anthranilate 1,2-dioxygenase small subunit; EC 1.14.12.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
RF|YP_047247.1 anthranilate 1,2-dioxygenase, small subunit; EC 1.14.12.1 from Acinetobacter sp. ADP1
PFams: SnoaL_4, Ring_hydroxyl_B
163 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_23690 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) from Pseudomonas simiae WCS417
PFams: SnoaL_4, Ring_hydroxyl_B
163 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_2739 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) from Pseudomonas fluorescens GW456-L13
PFams: SnoaL_4, Ring_hydroxyl_B
162 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_05955 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) from Pseudomonas fluorescens FW300-N2E3
PFams: SnoaL_4, Ring_hydroxyl_B
163 amino acids: PaperBLAST, CDD, Compare to cluster