Clusters of Characterized Proteins

Clustering the characterized proteins for ofo (branched-chain alpha-ketoacid:ferredoxin oxidoreductase, fused) in L-valine catabolism

Or see other characterized proteins similar to ofo

Or see all steps for L-valine catabolism

Or cluster curated proteins matching a keyword

Definition of ofo

• Curated sequence RR42_RS19540: 3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (EC 1.2.7.7)
• Curated sequence GFF3452: branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate
• Ignore hits to items matching 1.2.7.7 when looking for 'other' hits
• Ignore hits to items matching 1.2.7.11 when looking for 'other' hits

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 1156-1197 amino acids (not heteromeric)

RR42_RS19540 3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (EC 1.2.7.7) from Cupriavidus basilensis 4G11
PFams: TPP_enzyme_C, POR
1197 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3517 branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate from Pseudomonas stutzeri RCH2
PFams: POR
1156 amino acids: PaperBLAST, CDD, Compare to cluster