Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for xylB (xylulokinase) in xylitol catabolism

Or see other characterized proteins similar to xylB

Or see all steps for xylitol catabolism

Or cluster curated proteins matching a keyword

Definition of xylB

Curated proteins or TIGRFams with EC 2.7.1.17
UniProt sequence L0FZT0: SubName: Full=Pentulose/hexulose kinase {ECO:0000313|EMBL:AGA78130.1};
UniProt sequence Q97FW4: RecName: Full=Xylulose kinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; Short=Xylulokinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; EC=2.7.1.17 {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073};
UniProt sequence Q8A9M3: SubName: Full=Xylulose kinase (Xylulokinase) {ECO:0000313|EMBL:AAO75899.1};
Comment: Echvi_1875 (L0FZT0) is annotated as xylulose kinase and has its strongest phentoypes on xylose. CA_C2612 (Q97FW4) from Clostridium acetobutylicum was proven to be xylulose kinase (PMC2873477). BT0792 (Q8A9M3) has its strongest phenotypes on xylose.

Fetched 21 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 21 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 478-502 amino acids (not heteromeric)

Q9WXX1 xylulokinase (EC 2.7.1.17) from Thermotoga maritima
PFams: FGGY_N, FGGY_C
492 amino acids: PaperBLAST, CDD, Compare to cluster

b3564 xylulokinase (EC 2.7.1.17) from Escherichia coli K-12 substr. MG1655
P09099 xylulokinase (EC 2.7.1.17) from Escherichia coli (strain K12)
XYLB_ECOLI / P09099 Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli (strain K12)
GB|AAC76588.1 xylulokinase; EC 2.7.1.17 from Escherichia coli K12
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

XYLB_LACBR / P35850 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Lactobacillus brevis
PFams: FGGY_N, FGGY_C
502 amino acids: PaperBLAST, CDD, Compare to cluster

L0FZT0 Pentulose/hexulose kinase
496 amino acids: PaperBLAST, CDD, Compare to cluster

Q8A9M3 Xylulose kinase (Xylulokinase)
497 amino acids: PaperBLAST, CDD, Compare to cluster

Q97FW4 Xylulose kinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; Short=Xylulokinase {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}; EC=2.7.1.17 {ECO:0000256|HAMAP-Rule:MF_02220, ECO:0000256|RuleBase:RU364073}
500 amino acids: PaperBLAST, CDD, Compare to cluster

Dshi_1997 Xylulose kinase (EC 2.7.1.17) from Dinoroseobacter shibae DFL-12
PFams: FGGY_N, FGGY_C
480 amino acids: PaperBLAST, CDD, Compare to cluster

BWI76_RS27020 Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis M5al
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c14010 Xylulose kinase (EC 2.7.1.17) from Phaeobacter inhibens BS107
PFams: FGGY_N, FGGY_C
478 amino acids: PaperBLAST, CDD, Compare to cluster

SMc03164 Xylulose kinase (EC 2.7.1.17) from Sinorhizobium meliloti 1021
PFams: FGGY_N, FGGY_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_27695 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2C3
PFams: FGGY_N, FGGY_C
495 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_805 Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens FW300-N2E2
PFams: FGGY_N, FGGY_C
495 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 490-616 amino acids (not heteromeric)

F6JVF3 xylulokinase (EC 2.7.1.17) from Kluyveromyces marxianus
PFams: FGGY_N, FGGY_C
602 amino acids: PaperBLAST, CDD, Compare to cluster

XYLB_HUMAN / O75191 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Homo sapiens (Human)
O75191 xylulokinase (EC 2.7.1.17) from Homo sapiens
PFams: FGGY_N, FGGY_C
536 amino acids: PaperBLAST, CDD, Compare to cluster

Q4JHR4 xylulokinase (EC 2.7.1.17) from Candida maltosa
PFams: FGGY_N, FGGY_C
616 amino acids: PaperBLAST, CDD, Compare to cluster

W8VYH1 xylulokinase (EC 2.7.1.17) from Mucor circinelloides
PFams: FGGY_N, FGGY_C
521 amino acids: PaperBLAST, CDD, Compare to cluster

XKS1_YEAST / P42826 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: FGGY_N, FGGY_N, FGGY_C
600 amino acids: PaperBLAST, CDD, Compare to cluster

Q8X167 D-xylulose kinase subunit (EC 2.7.1.17) from Aspergillus niger
XKS1_ASPNG / Q8X167 D-xylulose kinase A; Xylulokinase A; EC 2.7.1.17 from Aspergillus niger
PFams: FGGY_N, FGGY_N, FGGY_C
570 amino acids: PaperBLAST, CDD, Compare to cluster

XK2_ARATH / Q949W8 Xylulose kinase 2; Atxk-2; Xylulokinase 2; 1-Deoxy-D-Xylulokinase; DXK; EC 2.7.1.17 from Arabidopsis thaliana (Mouse-ear cress)
PFams: FGGY_N, FGGY_C
558 amino acids: PaperBLAST, CDD, Compare to cluster

XKS1_SCHPO / Q9C0U6 Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: FGGY_N, FGGY_C
555 amino acids: PaperBLAST, CDD, Compare to cluster

Q3SYZ6 D-xylulokinase (EC 2.7.1.17) from Bos taurus
PFams: FGGY_N, FGGY_C
490 amino acids: PaperBLAST, CDD, Compare to cluster