PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.173 as complete word(s)

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Found 4 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 254-260 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A3LZU7 NAD+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.173) from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
RM1DH_PICST / A3LZU7 L-rhamnose-1-dehydrogenase; EC 1.1.1.173 from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
PFams: adh_short, KR, adh_short_C2
258 amino acids: PaperBLAST, CDD, Compare to cluster

C1DMX5 NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
PFams: adh_short, KR, adh_short_C2
256 amino acids: PaperBLAST, CDD, Compare to cluster

Q1NEJ0 NAD(P)+-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp. (strain SKA58)
PFams: adh_short, KR, adh_short_C2
254 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS28235 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) from Burkholderia phytofirmans PsJN
PFams: adh_short, KR, adh_short_C2
260 amino acids: PaperBLAST, CDD, Compare to cluster