PaperBLAST – Find papers about a protein or its homologs


Clusters of Characterized Proteins

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 248-259 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

CCNA_00864 D-xylose 1-dehydrogenase (EC from Caulobacter crescentus NA1000
XDH_CAUVN / B8H1Z0 D-xylose 1-dehydrogenase; XDH; EC from Caulobacter vibrioides (strain NA1000 / CB15N) (Caulobacter crescentus)
B8H1Z0 D-xylose 1-dehydrogenase (EC from Caulobacter vibrioides
PFams: adh_short, adh_short_C2
248 amino acids: PaperBLAST, CDD, Compare to cluster

Ga0059261_1894 D-xylose 1-dehydrogenase (EC from Sphingomonas koreensis DSMZ 15582
PFams: adh_short, Epimerase, adh_short_C2
259 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

GLCDH_HALMT / Q977U7 Glucose 1-dehydrogenase; GDH; GlcDH; EC from Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)
Q977U7 L-xylose 1-dehydrogenase (EC; glucose 1-dehydrogenase (NADP+) (EC; D-xylose 1-dehydrogenase (EC; glucose 1-dehydrogenase [NAD(P)+] (EC from Haloferax mediterranei
PFams: ADH_N, Glu_dehyd_C
357 amino acids: PaperBLAST, CDD