PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.28 as complete word(s)

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Found 17 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 17 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 17 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 322-337 amino acids (not heteromeric)

Q88VJ2 D-lactate dehydrogenase subunit (EC 1.1.1.28) from Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
C0LJH4 D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus plantarum subsp. plantarum
PFams: 2-Hacid_dh, 2-Hacid_dh_C, IlvN, NAD_binding_2
332 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0M3KL04 D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
335 amino acids: PaperBLAST, CDD, Compare to cluster

A0A140N893 D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
329 amino acids: PaperBLAST, CDD, Compare to cluster

F8A9V0 D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus
PFams: 2-Hacid_dh, 2-Hacid_dh_C
325 amino acids: PaperBLAST, CDD, Compare to cluster

F8RPR8 D-lactate dehydrogenase (EC 1.1.1.28) from Bacillus coagulans
PFams: 2-Hacid_dh, 2-Hacid_dh_C
329 amino acids: PaperBLAST, CDD, Compare to cluster

O66939 D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
334 amino acids: PaperBLAST, CDD, Compare to cluster

LDHD_LACDA / P26297 D-lactate dehydrogenase; D-LDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778)
P26297 D-lactate dehydrogenase (EC 1.1.1.28) from Lactobacillus delbrueckii subsp. bulgaricus
OMNI|NTL01LD0096 D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
PFams: 2-Hacid_dh, 2-Hacid_dh_C, AdoHcyase_NAD, NAD_binding_2
333 amino acids: PaperBLAST, CDD, Compare to cluster

Q8RG11 D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum subsp. nucleatum
PFams: 2-Hacid_dh, 2-Hacid_dh_C, AdoHcyase_NAD, NAD_binding_2
335 amino acids: PaperBLAST, CDD, Compare to cluster

Q9I530 D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
329 amino acids: PaperBLAST, CDD, Compare to cluster

CH_091795 D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus pentosus
PFams: 2-Hacid_dh, 2-Hacid_dh_C, IlvN, NAD_binding_2
332 amino acids: PaperBLAST, CDD, Compare to cluster

b1380 D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli K-12 substr. MG1655
P52643 D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli (strain K12)
CH_091799 D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli K12
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
329 amino acids: PaperBLAST, CDD, Compare to cluster

GB|CAA47255.1 D-lactate dehydrogenase; EC 1.1.1.28 from Lactobacillus helveticus
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
337 amino acids: PaperBLAST, CDD, Compare to cluster

P51011 D-lactate dehydrogenase subunit (EC 1.1.1.28) from Leuconostoc mesenteroides subsp. cremoris
CH_091801 D-lactate dehydrogenase; EC 1.1.1.28 from Leuconostoc mesenteroides subsp. cremoris
PFams: 2-Hacid_dh, 2-Hacid_dh_C, AlaDh_PNT_C, IlvN, AdoHcyase_NAD
331 amino acids: PaperBLAST, CDD, Compare to cluster

Q7B609 D-lactate dehydrogenase (EC 1.1.1.28) from Enterococcus faecium
VANH_ENTFC / Q05709 D-specific alpha-keto acid dehydrogenase; Vancomycin resistance protein VanH; EC 1.1.1.- from Enterococcus faecium (Streptococcus faecium)
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
322 amino acids: PaperBLAST, CDD, Compare to cluster

LDHD_PEDAC / Q59642 D-lactate/D-glycerate dehydrogenase; D-LDH/GDH; D-specific 2-hydroxyacid dehydrogenase; EC 1.1.1.28; EC 1.1.1.29 from Pediococcus acidilactici
GI|897794 D-lactate dehydrogenase; EC 1.1.1.28; EC 1.1.1.81 from Pediococcus acidilactici
PFams: 2-Hacid_dh, 2-Hacid_dh_C
331 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 473-482 amino acids (not heteromeric)

A0A0G2K1W9 D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus
PFams: FAD_binding_4, FAD-oxidase_C
482 amino acids: PaperBLAST, CDD, Compare to cluster

Q9YEU4 D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix
PFams: FAD_binding_4, FAD-oxidase_C
473 amino acids: PaperBLAST, CDD, Compare to cluster