Clusters of Characterized Proteins

PaperBLAST – Find papers about a protein or its homologs

Clusters of Characterized Proteins

Searching for 1.1.1.3 as complete word(s)

Found 19 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 19 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 19 of these sequences

Found 3 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 413-445 amino acids (not heteromeric)

DHOM_CORGL / P08499 Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
P08499 homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum
PFams: NAD_binding_3, Homoserine_dh, ACT
445 amino acids: PaperBLAST, CDD, Compare to cluster

D8WXQ1 homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus
PFams: NAD_binding_3, Homoserine_dh, ACT
432 amino acids: PaperBLAST, CDD, Compare to cluster

D8WXQ2 homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus
PFams: NAD_binding_3, Homoserine_dh
413 amino acids: PaperBLAST, CDD, Compare to cluster

P46806 homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae
PFams: NAD_binding_3, Homoserine_dh, ACT
441 amino acids: PaperBLAST, CDD, Compare to cluster

Q56R01 homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus
PFams: NAD_binding_3, Homoserine_dh, ACT
433 amino acids: PaperBLAST, CDD, Compare to cluster

DHOM_BACSU / P19582 Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis (strain 168)
PFams: NAD_binding_3, Homoserine_dh, ACT
433 amino acids: PaperBLAST, CDD, Compare to cluster

DHOM_LACLC / P52985 Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis subsp. cremoris (Streptococcus cremoris)
PFams: NAD_binding_3, Homoserine_dh
428 amino acids: PaperBLAST, CDD, Compare to cluster

Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis DSMZ 15582
PFams: NAD_binding_3, Homoserine_dh, ACT
430 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 810-916 amino acids (not heteromeric)

AKH2_ARATH / O81852 Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana (Mouse-ear cress)
PFams: AA_kinase, ACT, ACT_7, ACT, NAD_binding_3, Homoserine_dh
916 amino acids: PaperBLAST, CDD, Compare to cluster

O63067 homoserine dehydrogenase (EC 1.1.1.3) from Glycine max
PFams: AA_kinase, ACT, ACT_7, ACT, NAD_binding_3, Homoserine_dh
916 amino acids: PaperBLAST, CDD, Compare to cluster

AKH1_ARATH / Q9SA18 Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana (Mouse-ear cress)
PFams: AA_kinase, ACT_7, ACT, ACT_7, ACT, NAD_binding_3, Homoserine_dh
911 amino acids: PaperBLAST, CDD, Compare to cluster

b0002 fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli K-12 substr. MG1655
P00561 fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli (strain K12)
PFams: AA_kinase, ACT_7, ACT, ACT_7, ACT, NAD_binding_3, Homoserine_dh
820 amino acids: PaperBLAST, CDD, Compare to cluster

b3940 fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli K-12 substr. MG1655
P00562 fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli (strain K12)
PFams: AA_kinase, NAD_binding_3, Homoserine_dh
810 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 359-376 amino acids (not heteromeric)

Q5AIA2 homoserine dehydrogenase (EC 1.1.1.3) from Candida albicans
PFams: NAD_binding_3, Homoserine_dh
359 amino acids: PaperBLAST, CDD, Compare to cluster

Q3S3F6 homoserine dehydrogenase (EC 1.1.1.3) from Glycine max
PFams: Homoserine_dh
376 amino acids: PaperBLAST, CDD, Compare to cluster

DHOM_YEAST / P31116 Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: NAD_binding_3, Homoserine_dh
359 amino acids: PaperBLAST, CDD, Compare to cluster

DHOM_EMENI / Q5B998 Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
CH_122339 homoserine dehydrogenase; EC 1.1.1.3 from Emericella nidulans
PFams: NAD_binding_3, Homoserine_dh
368 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

A0A0H2WVX4 homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus
PFams: NAD_binding_3, Homoserine_dh
426 amino acids: PaperBLAST, CDD
(similar to BRENDA::D8WXQ2 from Cluster 1, but similarity to seed sequence is below thresholds)

O58802 homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii
PFams: NAD_binding_3, Homoserine_dh
319 amino acids: PaperBLAST, CDD
(similar to BRENDA::D8WXQ2 from Cluster 1, but similarity to seed sequence is below thresholds)