PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.312 as complete word(s)

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Found 2 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 315-319 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q9KWL3 LigC (EC 1.1.1.312) from Sphingobium sp. (strain NBRC 103272 / SYK-6)
LIGC_SPHSK / Q9KWL3 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp. (strain NBRC 103272 / SYK-6)
PFams: GFO_IDH_MocA, F420_oxidored
315 amino acids: PaperBLAST, CDD, Compare to cluster

Q75T27 α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea
PFams: GFO_IDH_MocA, Semialdhyde_dh
319 amino acids: PaperBLAST, CDD, Compare to cluster