PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.343

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Found 5 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 298-332 amino acids (not heteromeric)

A0A1J5NX54 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica
PFams: F420_oxidored, NAD_binding_2, 6PGD
298 amino acids: PaperBLAST, CDD, Compare to cluster

6PGD_HALVD / D4GST8 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating; 6PGDH; EC 1.1.1.343 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
D4GST8 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343) from Haloferax volcanii
PFams: NAD_binding_2, F420_oxidored, 6PGD
299 amino acids: PaperBLAST, CDD, Compare to cluster

6PGDH_GLUOX / G5EBD7 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating; 6PGDH; EC 1.1.1.343 from Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans)
G5EBD7 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343) from Gluconobacter oxydans
PFams: F420_oxidored, NAD_binding_2, 3HCDH_N, 6PGD
332 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 468-469 amino acids (not heteromeric)

6PGDH_BACSU / P12013 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating; EC 1.1.1.343 from Bacillus subtilis (strain 168)
P12013 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343) from Bacillus subtilis
PFams: NAD_binding_2, 3HCDH_N, 6PGD
468 amino acids: PaperBLAST, CDD, Compare to cluster

Q9WYR9 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Thermotoga maritima
PFams: F420_oxidored, NAD_binding_2, 6PGD
469 amino acids: PaperBLAST, CDD, Compare to cluster