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Clusters of Characterized Proteins

Searching for 1.1.1.41

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Found 39 characterized proteins with matching descriptions. 9 of these are heteromeric.

Fetched 39 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 35 of these sequences

Found 7 clusters of similar sequences. Another 5 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 356-429 amino acids (9/17 heteromeric)

G1APK2 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

G1APK3 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides
PFams: Iso_dh
371 amino acids: PaperBLAST, CDD, Compare to cluster

IDH3_ARATH / O81796 Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial; IDH-III; Isocitric dehydrogenase 3; NAD(+)-specific ICDH 3; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress)
O81796 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana
PFams: Iso_dh
Heteromeric, 368 amino acids: PaperBLAST, CDD, Compare to cluster

P28241 isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
IDH2_YEAST / P28241 Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P28241 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae
PFams: Iso_dh
Heteromeric, 369 amino acids: PaperBLAST, CDD, Compare to cluster

P28834 isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
IDH1_YEAST / P28834 Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P28834 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae
PFams: Iso_dh
Heteromeric, 360 amino acids: PaperBLAST, CDD, Compare to cluster

P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens
IDH3A_HUMAN / P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens (Human)
P50213 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Homo sapiens
PFams: Iso_dh
Heteromeric, 366 amino acids: PaperBLAST, CDD, Compare to cluster

P93032 NAD+-dependent isocitrate dehydrogenase regulatory subunit (EC 1.1.1.286) from Arabidopsis thaliana
IDH2_ARATH / P93032 Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial; IDH-II; Isocitric dehydrogenase 2; NAD(+)-specific ICDH 2; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress)
P93032 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana
PFams: Iso_dh
Heteromeric, 367 amino acids: PaperBLAST, CDD, Compare to cluster

Q8GAX0 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Acidithiobacillus thiooxidans
PFams: Iso_dh
429 amino acids: PaperBLAST, CDD, Compare to cluster

IDH1_ARATH / Q8LFC0 Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial; IDH-I; Isocitric dehydrogenase 1; NAD(+)-specific ICDH 1; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress)
Q8LFC0 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana
PFams: Iso_dh
Heteromeric, 367 amino acids: PaperBLAST, CDD, Compare to cluster

IDH6_ARATH / Q8LG77 Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress)
Q8LG77 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana
PFams: Iso_dh
Heteromeric, 374 amino acids: PaperBLAST, CDD, Compare to cluster

Q8U488 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Pyrococcus furiosus
PFams: Iso_dh
400 amino acids: PaperBLAST, CDD, Compare to cluster

Q945K7 NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana
IDH5_ARATH / Q945K7 Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress)
Q945K7 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana
PFams: Iso_dh
Heteromeric, 374 amino acids: PaperBLAST, CDD, Compare to cluster

Q9D6R2 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus
PFams: Iso_dh
366 amino acids: PaperBLAST, CDD, Compare to cluster

RF|NP_594397.1 isocitrate dehydrogenase (NAD+) subunit 1 Idh1; EC 1.1.1.41 from Schizosaccharomyces pombe
PFams: Iso_dh
356 amino acids: PaperBLAST, CDD, Compare to cluster

RF|NP_595203.1 isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe
PFams: Iso_dh
378 amino acids: PaperBLAST, CDD, Compare to cluster

IDH3A_RAT / Q99NA5 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Rattus norvegicus (Rat)
Q99NA5 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rattus norvegicus
PFams: Iso_dh
Heteromeric, 366 amino acids: PaperBLAST, CDD, Compare to cluster

IDH2_SCHPO / Q9USP8 Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: Iso_dh
379 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 330-439 amino acids (not heteromeric)

OLED_STRMK / B2FI29 2-alkyl-3-oxoalkanoate reductase; EC 1.1.1.412 from Stenotrophomonas maltophilia (strain K279a)
B2FI29 2-alkyl-3-oxoalkanoate reductase (EC 1.1.1.412) from Stenotrophomonas maltophilia
PFams: RmlD_sub_bind, Epimerase, NmrA, Polysacc_synt_2, 3Beta_HSD, GDP_Man_Dehyd, NAD_binding_10, NAD_binding_4
330 amino acids: PaperBLAST, CDD, Compare to cluster

Q8EG63 hentriaconta-3,6,9,12,19,22,25,28-octaene-16-one-15-oate reductase (EC 1.1.1.412) from Shewanella oneidensis (strain MR-1)
OLED_SHEON / Q8EG63 2-alkyl-3-oxoalkanoate reductase; EC 1.1.1.412 from Shewanella oneidensis (strain MR-1)
PFams: Epimerase, GDP_Man_Dehyd, Polysacc_synt_2, RmlD_sub_bind, 3Beta_HSD, NmrA, NAD_binding_10, NAD_binding_4
387 amino acids: PaperBLAST, CDD, Compare to cluster

Q8PDW5 2-alkyl-3-oxo-fatty acid reductase monomer (EC 1.1.1.412) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
OLED_XANCP / Q8PDW5 2-alkyl-3-oxoalkanoate reductase; EC 1.1.1.412 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
PFams: RmlD_sub_bind, Epimerase, NmrA, Polysacc_synt_2, 3Beta_HSD, GDP_Man_Dehyd, NAD_binding_10, NAD_binding_4
337 amino acids: PaperBLAST, CDD, Compare to cluster

Q9FX01 plant 3β-hydroxysteroid dehydrogenase/C4-decarboxylase 1 (EC 1.1.1.418) from Arabidopsis thaliana
PFams: 3Beta_HSD, Epimerase, NmrA, Polysacc_synt_2, GDP_Man_Dehyd, NAD_binding_4, NAD_binding_10, RmlD_sub_bind
439 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 297-304 amino acids (not heteromeric)

LTND_CUPNH / Q0KBC7 L-threonate dehydrogenase; EC 1.1.1.411 from Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Q0KBC7 L-threonate 2-dehydrogenase (EC 1.1.1.411) from Cupriavidus necator
PFams: 2-Hacid_dh_C, 3HCDH_N, NAD_binding_2, F420_oxidored, NAD_binding_11
297 amino acids: PaperBLAST, CDD, Compare to cluster

LTND_ECOL6 / A0A0H2VA68 L-threonate dehydrogenase; EC 1.1.1.411 from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
PFams: NAD_binding_2, NAD_binding_11
302 amino acids: PaperBLAST, CDD, Compare to cluster

P44979 L-threonate 2-dehydrogenase (EC 1.1.1.411) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
LTND_HAEIN / P44979 L-threonate dehydrogenase; EC 1.1.1.411 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
PFams: 3HCDH_N, NAD_binding_2, NAD_binding_11
301 amino acids: PaperBLAST, CDD, Compare to cluster

LTND_PECAS / Q6CZ26 L-threonate dehydrogenase; EC 1.1.1.411 from Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Q6CZ26 L-threonate 2-dehydrogenase (EC 1.1.1.411) from Pectobacterium atrosepticum
PFams: 3HCDH_N, NAD_binding_2, NAD_binding_11
304 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 339-340 amino acids (not heteromeric)

A6KWY5 L-galactonate 5-dehydrogenase (EC 1.1.1.414) from Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154)
A6KWY5 L-galactonate 5-dehydrogenase (NAD+) (EC 1.1.1.414) from Bacteroides vulgatus
PFams: ADH_N, Glu_dehyd_C, ADH_zinc_N
339 amino acids: PaperBLAST, CDD, Compare to cluster

Q8XB60 L-gulonate 5-dehydrogenase (EC 1.1.1.380); L-galactonate 5-dehydrogenase (NAD+) (EC 1.1.1.414) from Escherichia coli
PFams: ADH_N, Glu_dehyd_C, AlaDh_PNT_C, ADH_zinc_N, ADH_zinc_N_2
340 amino acids: PaperBLAST, CDD, Compare to cluster

b4358 L-galactonate oxidoreductase (EC 1.1.1.414) from Escherichia coli K-12 substr. MG1655
P39400 L-galactonate oxidoreductase (EC 1.1.1.414) from Escherichia coli (strain K12)
LGOD_ECOLI / P39400 L-galactonate-5-dehydrogenase; EC 1.1.1.414 from Escherichia coli (strain K12)
PFams: ADH_N, Glu_dehyd_C, AlaDh_PNT_C, ADH_zinc_N, ADH_zinc_N_2
340 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 5 315-324 amino acids (not heteromeric)

DEND_CUPNH / Q0KBD2 D-erythronate dehydrogenase; EC 1.1.1.410 from Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
Q0KBD2 D-erythronate 2-dehydrogenase (EC 1.1.1.410) from Cupriavidus necator
PFams: RmlD_sub_bind, Epimerase, KR, 3Beta_HSD, GDP_Man_Dehyd, NAD_binding_4
324 amino acids: PaperBLAST, CDD, Compare to cluster

P44094 D-erythronate 2-dehydrogenase (EC 1.1.1.410) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
DEND_HAEIN / P44094 D-erythronate dehydrogenase; EC 1.1.1.410 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
PFams: RmlD_sub_bind, Epimerase, Polysacc_synt_2, 3Beta_HSD, GDP_Man_Dehyd, NAD_binding_4
315 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 6 731-731 amino acids (not heteromeric)

A0A0M4S9Q1 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter curvus
PFams: IDH
731 amino acids: PaperBLAST, CDD, Compare to cluster

J4X756 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Campylobacter sp.
PFams: IDH
731 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 7 407-409 amino acids (not heteromeric)

A4SBK5 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Ostreococcus sp. 'lucimarinus'
PFams: Iso_dh
409 amino acids: PaperBLAST, CDD, Compare to cluster

C1E5X2 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Micromonas commoda
PFams: Iso_dh
407 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/5 heteromeric)

A4ADB8 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Congregibacter litoralis
PFams: Iso_dh
580 amino acids: PaperBLAST, CDD

I3PLR3 noscapine synthase (EC 1.1.1.415) from Papaver somniferum
SDR1_PAPSO / I3PLR3 Noscapine synthase SDR1; Short-chain dehydrogenase/reductase 1; PsSDR1; EC 1.1.1.415 from Papaver somniferum (Opium poppy)
I3PLR3 noscapine synthase (EC 1.1.1.415) from Papaver somniferum
PFams: Epimerase, NmrA, Polysacc_synt_2, 3Beta_HSD, GDP_Man_Dehyd, NAD_binding_4, NAD_binding_10
348 amino acids: PaperBLAST, CDD

Q9LBV3 A-factor type γ-butyrolactone 6-reductase (6S-forming) monomer (EC 1.1.1.413) from Streptomyces virginiae
BARS1_STRVG / Q9LBV3 A-factor type gamma-butyrolactone 1'-reductase (1S-forming); 6-dehydro-VB-A reductase; Butyrolactone autoregulator synthesis; EC 1.1.1.413 from Streptomyces virginiae
PFams: adh_short, KR, adh_short_C2
257 amino acids: PaperBLAST, CDD

Q67ZE1 plant 3β-hydroxysteroid dehydrogenase/C4-decarboxylase 2 (EC 1.1.1.418) from Arabidopsis thaliana
PFams: 3Beta_HSD, Epimerase, NmrA, Polysacc_synt_2, GDP_Man_Dehyd, NAD_binding_4, RmlD_sub_bind, NAD_binding_10, Reticulon
564 amino acids: PaperBLAST, CDD
(similar to metacyc::AT1G47290-MONOMER from Cluster 2, but similarity to seed sequence is below thresholds)

Q60A54 3β-hydroxysteroid-4α-carboxylate 3-dehydrogenase (decarboxylating)/3β-hydroxysteroid 3-dehydrogenase (EC 1.1.1.270; EC 1.1.1.417) from Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
PFams: RmlD_sub_bind, 3Beta_HSD, Epimerase, GDP_Man_Dehyd, NmrA, Polysacc_synt_2, NAD_binding_10, NAD_binding_4
328 amino acids: PaperBLAST, CDD