PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.42 as complete word(s)

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Found 46 characterized proteins with matching descriptions. 1 of these are heteromeric.

Fetched 46 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 46 of these sequences

Found 3 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 399-493 amino acids (1/26 heteromeric)

P9WKL1 isocitrate dehydrogenase subunit (EC 1.1.1.42) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A5U813 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mycobacterium tuberculosis
P9WKL1 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mycobacterium tuberculosis
PFams: Iso_dh
409 amino acids: PaperBLAST, CDD, Compare to cluster

B7GQR3 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Bifidobacterium longum subsp. infantis
PFams: Iso_dh
406 amino acids: PaperBLAST, CDD, Compare to cluster

J9Q6L4 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Capsicum annuum
PFams: Iso_dh
415 amino acids: PaperBLAST, CDD, Compare to cluster

O65853 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Nicotiana tabacum
PFams: Iso_dh
482 amino acids: PaperBLAST, CDD, Compare to cluster

O75874 cytosolic NADP(+)-dependent isocitrate dehydrogenase monomer (EC 1.1.1.42) from Homo sapiens
IDHC_HUMAN / O75874 Isocitrate dehydrogenase [NADP] cytoplasmic; IDH; Cytosolic NADP-isocitrate dehydrogenase; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Homo sapiens (Human)
O75874 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Homo sapiens
PFams: Iso_dh
414 amino acids: PaperBLAST, CDD, Compare to cluster

IDHC_MOUSE / O88844 Isocitrate dehydrogenase [NADP] cytoplasmic; IDH; Cytosolic NADP-isocitrate dehydrogenase; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Mus musculus (Mouse)
O88844 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mus musculus
PFams: Iso_dh
414 amino acids: PaperBLAST, CDD, Compare to cluster

P21954 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Saccharomyces cerevisiae
PFams: Iso_dh
428 amino acids: PaperBLAST, CDD, Compare to cluster

IDHC_RAT / P41562 Isocitrate dehydrogenase [NADP] cytoplasmic; IDH; Cytosolic NADP-isocitrate dehydrogenase; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Rattus norvegicus (Rat)
P41562 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Rattus norvegicus
PFams: Iso_dh
414 amino acids: PaperBLAST, CDD, Compare to cluster

IDHC_YEAST / P41939 Isocitrate dehydrogenase [NADP] cytoplasmic; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P41939 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Saccharomyces cerevisiae
PFams: Iso_dh
412 amino acids: PaperBLAST, CDD, Compare to cluster

P48735 mitochondrial isocitrate dehydrogenase monomer (EC 1.1.1.42) from Homo sapiens
IDHP_HUMAN / P48735 Isocitrate dehydrogenase [NADP], mitochondrial; IDH; ICD-M; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Homo sapiens (Human)
P48735 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Homo sapiens
PFams: Iso_dh
452 amino acids: PaperBLAST, CDD, Compare to cluster

IDHP_MOUSE / P54071 Isocitrate dehydrogenase [NADP], mitochondrial; IDH; ICD-M; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Mus musculus (Mouse)
P54071 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mus musculus
PFams: Iso_dh
452 amino acids: PaperBLAST, CDD, Compare to cluster

IDHP_RAT / P56574 Isocitrate dehydrogenase [NADP], mitochondrial; IDH; ICD-M; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Rattus norvegicus (Rat)
P56574 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Rattus norvegicus
PFams: Iso_dh
452 amino acids: PaperBLAST, CDD, Compare to cluster

Q4DG65 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Trypanosoma cruzi
PFams: Iso_dh
433 amino acids: PaperBLAST, CDD, Compare to cluster

Q4E4L7 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Trypanosoma cruzi
PFams: Iso_dh
413 amino acids: PaperBLAST, CDD, Compare to cluster

Q6AQ66 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Desulfotalea psychrophila
PFams: Iso_dh
402 amino acids: PaperBLAST, CDD, Compare to cluster

Q6C2Y4 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Yarrowia lipolytica
PFams: Iso_dh
416 amino acids: PaperBLAST, CDD, Compare to cluster

Q6R6M7 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Pisum sativum
PFams: Iso_dh
412 amino acids: PaperBLAST, CDD, Compare to cluster

ICDHX_ARATH / Q9SLK0 Peroxisomal isocitrate dehydrogenase [NADP]; EC 1.1.1.42 from Arabidopsis thaliana (Mouse-ear cress)
Q9SLK0 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Arabidopsis thaliana
PFams: Iso_dh
416 amino acids: PaperBLAST, CDD, Compare to cluster

Q9X0N2 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermotoga maritima
PFams: Iso_dh
399 amino acids: PaperBLAST, CDD, Compare to cluster

CH_122063 mitochondrial NADP-dependent isocitrate dehydrogenase; EC 1.1.1.42 from Emericella nidulans
PFams: Iso_dh
493 amino acids: PaperBLAST, CDD, Compare to cluster

IDHP_SCHPO / O14254 Probable isocitrate dehydrogenase [NADP], mitochondrial; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: Iso_dh
439 amino acids: PaperBLAST, CDD, Compare to cluster

IDHP_PIG / P33198 Isocitrate dehydrogenase [NADP], mitochondrial; IDH; ICD-M; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Sus scrofa (Pig)
PFams: Iso_dh
421 amino acids: PaperBLAST, CDD, Compare to cluster

IDHC_SOYBN / Q06197 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Glycine max (Soybean) (Glycine hispida)
PFams: Iso_dh
Heteromeric, 413 amino acids: PaperBLAST, CDD, Compare to cluster

ICDHP_ARATH / Q8LPJ5 Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial; EC 1.1.1.42 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Iso_dh
485 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SRZ6 NADP+-dependent isocitrate dehydrogenase (EC 1.1.1.42) from Arabidopsis thaliana
ICDHC_ARATH / Q9SRZ6 Cytosolic isocitrate dehydrogenase [NADP]; EC 1.1.1.42 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Iso_dh
410 amino acids: PaperBLAST, CDD, Compare to cluster

IDHC_BOVIN / Q9XSG3 Isocitrate dehydrogenase [NADP] cytoplasmic; IDH; Cytosolic NADP-isocitrate dehydrogenase; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bos taurus (Bovine)
PFams: Iso_dh
414 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 405-496 amino acids (not heteromeric)

O29610 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Archaeoglobus fulgidus
PFams: Iso_dh
412 amino acids: PaperBLAST, CDD, Compare to cluster

A8YGS2 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Microcystis aeruginosa
PFams: Iso_dh, Iso_dh
478 amino acids: PaperBLAST, CDD, Compare to cluster

b1136 isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli K-12 substr. MG1655
P08200 isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli (strain K12)
IDH_ECOLI / P08200 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Escherichia coli (strain K12)
P08200 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42); [Isocitrate dehydrogenase (NADP+)] kinase (EC 2.7.11.5) from Escherichia coli
PFams: Iso_dh
416 amino acids: PaperBLAST, CDD, Compare to cluster

P33197 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus
RF|YP_144801.1 isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus HB8
PFams: Iso_dh, TT1725
496 amino acids: PaperBLAST, CDD, Compare to cluster

P96318 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Caldococcus noboribetus
PFams: Iso_dh
429 amino acids: PaperBLAST, CDD, Compare to cluster

Q1XIQ8 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea
PFams: Iso_dh
416 amino acids: PaperBLAST, CDD, Compare to cluster

Q9HLV8 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermoplasma acidophilum
PFams: Iso_dh
405 amino acids: PaperBLAST, CDD, Compare to cluster

Q9YE81 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Aeropyrum pernix
PFams: Iso_dh
432 amino acids: PaperBLAST, CDD, Compare to cluster

IDH_BACSU / P39126 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Bacillus subtilis (strain 168)
GB|CAB14873.1 isocitrate dehydrogenase; EC 1.1.1.42 from Bacillus subtilis
PFams: Iso_dh
423 amino acids: PaperBLAST, CDD, Compare to cluster

IDH_HALVD / D4GU92 Isocitrate dehydrogenase [NADP]; IDH; ICDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
PFams: Iso_dh
419 amino acids: PaperBLAST, CDD, Compare to cluster

IDH_PSEAB / Q02NB5 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Pseudomonas aeruginosa (strain UCBPP-PA14)
PFams: Iso_dh
418 amino acids: PaperBLAST, CDD, Compare to cluster

IDH_COXBU / Q9ZH99 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
PFams: Iso_dh
427 amino acids: PaperBLAST, CDD, Compare to cluster

B2ZP83 isocitrate dehydrogenase subunit (EC 1.1.1.42) from Helicobacter pylori
PFams: Iso_dh
425 amino acids: PaperBLAST, CDD, Compare to cluster

Q5UXA4 isocitrate dehydrogenase, NADP (EC 1.1.1.42) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
PFams: Iso_dh
420 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 738-745 amino acids (not heteromeric)

B2ZAA4 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Streptomyces lividans
PFams: IDH
739 amino acids: PaperBLAST, CDD, Compare to cluster

O53611 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Mycobacterium tuberculosis
PFams: IDH
745 amino acids: PaperBLAST, CDD, Compare to cluster

IDH_CORGL / P50216 Isocitrate dehydrogenase [NADP]; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
P50216 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Corynebacterium glutamicum
PFams: IDH
738 amino acids: PaperBLAST, CDD, Compare to cluster

Q1XIQ9 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Colwellia psychrerythraea
PFams: IDH
743 amino acids: PaperBLAST, CDD, Compare to cluster

P16100 isocitrate dehydrogenase (NADP-dependent) (EC 1.1.1.42) from Azotobacter vinelandii
IDH_AZOVI / P16100 Isocitrate dehydrogenase [NADP]; IDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Azotobacter vinelandii
PFams: IDH
741 amino acids: PaperBLAST, CDD, Compare to cluster

Q8L0X8 isocitrate dehydrogenase (EC 1.1.1.42) from Chlorobium limicola
PFams: IDH
741 amino acids: PaperBLAST, CDD, Compare to cluster