PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.60 as complete word(s)

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 290-296 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q8ZLV8 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica subsp. enterica serovar Typhimurium
PFams: 2-Hacid_dh_C, F420_oxidored, NAD_binding_2, NAD_binding_11
296 amino acids: PaperBLAST, CDD, Compare to cluster

b3125 tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli K-12 substr. MG1655
P0ABQ2 tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli (strain K12)
GARR_ECOLI / P0ABQ2 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli (strain K12)
PFams: 2-Hacid_dh_C, F420_oxidored, NAD_binding_2, NAD_binding_11
294 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c14880 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Phaeobacter inhibens BS107
PFams: Shikimate_DH, 3HCDH_N, F420_oxidored, NAD_binding_2, ApbA, NAD_binding_11
290 amino acids: PaperBLAST, CDD, Compare to cluster