PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.71 as complete word(s)

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Found 9 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 2 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 347-384 amino acids (not heteromeric)

D4GP73 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii
PFams: ADH_N, ADH_zinc_N
349 amino acids: PaperBLAST, CDD, Compare to cluster

Q5V676 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloarcula marismortui
PFams: ADH_N, ADH_zinc_N
384 amino acids: PaperBLAST, CDD, Compare to cluster

Q9HMB6 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.
PFams: ADH_N_assoc, ADH_N, ADH_zinc_N
347 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 859-873 amino acids (not heteromeric)

A0A0H3W5U9 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Hungateiclostridium thermocellum
A3DCI2 alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Hungateiclostridium thermocellum
PFams: Aldedh, Fe-ADH, Fe-ADH_2, Fe-ADH_2
873 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0H3W5V0 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum
PFams: Aldedh, Fe-ADH, Fe-ADH_2, Fe-ADH_2
859 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/4 heteromeric)

C6A190 alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus
PFams: adh_short, KR, adh_short_C2
234 amino acids: PaperBLAST, CDD

Q8H0L8 alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum
PFams: ADH_N, ADH_zinc_N
359 amino acids: PaperBLAST, CDD

RDH14_HUMAN / Q9HBH5 Retinol dehydrogenase 14; Alcohol dehydrogenase PAN2; Short chain dehydrogenase/reductase family 7C member 4; EC 1.1.1.300 from Homo sapiens (Human)
Q9HBH5 NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens
PFams: adh_short, KR, Epimerase, adh_short_C2
336 amino acids: PaperBLAST, CDD

U6CL97 alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum
PFams: Fe-ADH, Fe-ADH_2
387 amino acids: PaperBLAST, CDD