PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.1.87 as complete word(s)

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Found 4 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 334-371 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

LYS12_YEAST / P40495 Homoisocitrate dehydrogenase, mitochondrial; HIcDH; EC 1.1.1.87 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P40495 homoisocitrate dehydrogenase (EC 1.1.1.87) from Saccharomyces cerevisiae
PFams: Iso_dh
371 amino acids: PaperBLAST, CDD, Compare to cluster

Q5SIJ1 homoisocitrate dehydrogenase subunit (EC 1.1.1.87) from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
HICDH_THET8 / Q5SIJ1 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
HICDH_THET2 / Q72IW9 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Q5SIJ1 homoisocitrate dehydrogenase (EC 1.1.1.87) from Thermus thermophilus
Q72IW9 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286); 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus
PFams: Iso_dh
334 amino acids: PaperBLAST, CDD, Compare to cluster

LYS12_SCHPO / O14104 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: Iso_dh
362 amino acids: PaperBLAST, CDD, Compare to cluster

Q58991 NAD-dependent threo-isocitrate dehydrogenase (EC 1.1.1.87) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
AKSF_METJA / Q58991 Homoisocitrate dehydrogenase; HICDH; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Q58991 methanogen homoaconitase (EC 4.2.1.114) from Methanocaldococcus jannaschii
PFams: Iso_dh
347 amino acids: PaperBLAST, CDD, Compare to cluster