Clusters of Characterized Proteins

PaperBLAST – Find papers about a protein or its homologs

Clusters of Characterized Proteins

Searching for 1.1.1.95

Found 20 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 20 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 19 of these sequences

Found 4 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 525-624 amino acids (not heteromeric)

P9WNX3 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2, ACT
528 amino acids: PaperBLAST, CDD, Compare to cluster

SERA2_ARATH / O04130 D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana (Mouse-ear cress)
O04130 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana
PFams: 2-Hacid_dh, 2-Hacid_dh_C, IlvN, ACT
624 amino acids: PaperBLAST, CDD, Compare to cluster

O43175 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens
SERA_HUMAN / O43175 D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens (Human)
O43175 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens
PFams: 2-Hacid_dh, 2-Hacid_dh_C
533 amino acids: PaperBLAST, CDD, Compare to cluster

SERA1_ARATH / O49485 D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana (Mouse-ear cress)
O49485 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana
PFams: 2-Hacid_dh, 2-Hacid_dh_C, AdoHcyase_NAD, IlvN, ACT
603 amino acids: PaperBLAST, CDD, Compare to cluster

SERA_MOUSE / Q61753 D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus (Mouse)
Q61753 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus
PFams: 2-Hacid_dh, 2-Hacid_dh_C
533 amino acids: PaperBLAST, CDD, Compare to cluster

SERA3_ARATH / Q9LT69 D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana (Mouse-ear cress)
Q9LT69 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana
PFams: 2-Hacid_dh, 2-Hacid_dh_C, IlvN, ACT
588 amino acids: PaperBLAST, CDD, Compare to cluster

Q9Z564 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2, ACT
529 amino acids: PaperBLAST, CDD, Compare to cluster

GB|AAC83943.1 phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2, ACT
525 amino acids: PaperBLAST, CDD, Compare to cluster

O08651 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus
SERA_RAT / O08651 D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus (Rat)
PFams: 2-Hacid_dh, 2-Hacid_dh_C
533 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 410-469 amino acids (not heteromeric)

b2913 phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli K-12 substr. MG1655
P0A9T0 phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli (strain K12)
SERA_ECOLI / P0A9T0 D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli (strain K12)
P0A9T0 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
RF|NP_417388 D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli K12
PFams: 2-Hacid_dh, 2-Hacid_dh_C, ACT
410 amino acids: PaperBLAST, CDD, Compare to cluster

U3RH61 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii
PFams: 2-Hacid_dh, 2-Hacid_dh_C
442 amino acids: PaperBLAST, CDD, Compare to cluster

SERA_YEAST / P40054 D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
469 amino acids: PaperBLAST, CDD, Compare to cluster

SER33_YEAST / P40510 D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
469 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 299-394 amino acids (not heteromeric)

Q972A9 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii
PFams: 2-Hacid_dh, 2-Hacid_dh_C
313 amino acids: PaperBLAST, CDD, Compare to cluster

O58256 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii
PFams: 2-Hacid_dh, 2-Hacid_dh_C, IlvN, F420_oxidored, NAD_binding_2
333 amino acids: PaperBLAST, CDD, Compare to cluster

Q76KF5 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica
CH_000791 D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica HM-1:IMSS
PFams: 2-Hacid_dh, 2-Hacid_dh_C
299 amino acids: PaperBLAST, CDD, Compare to cluster

A2DLU8 phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis
PFams: 2-Hacid_dh, 2-Hacid_dh_C, NAD_binding_2
394 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 1333-1364 amino acids (not heteromeric)

BPHYT_RS03150 Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans PsJN
PFams: DUF3683, FAD_binding_4, FAD-oxidase_C, FAD-oxidase_C, Fer4_8, CCG, CCG, DUF3400
1364 amino acids: PaperBLAST, CDD, Compare to cluster

HSERO_RS19500 Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae SmR1
PFams: DUF3683, FAD_binding_4, FAD-oxidase_C, FAD-oxidase_C, Fer4_8, Fer4_17, CCG, CCG, DUF3400
1333 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Sama_3039 Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis SB2B
PFams: 2-Hacid_dh_C, NAD_binding_2
308 amino acids: PaperBLAST, CDD