PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.2.3 as complete word(s)

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Found 6 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 376-396 amino acids (not heteromeric)

b3605 L-lactate dehydrogenase from Escherichia coli K-12 substr. MG1655
P33232 L-lactate dehydrogenase from Escherichia coli (strain K12)
LLDD_ECOLI / P33232 L-lactate dehydrogenase; EC 1.1.-.- from Escherichia coli (strain K12)
CH_000618 L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli K12
PFams: FMN_dh
396 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b20850 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti 1021
PFams: FMN_dh, NMO, Glu_synthase
378 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_19130 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae WCS417
PFams: FMN_dh
376 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_1623 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Acidovorax sp. GW101-3H11
PFams: FMN_dh, NMO
390 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 558-591 amino acids (not heteromeric)

P00175 L-lactate dehydrogenase subunit (EC 1.1.2.3) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
CYB2_YEAST / P00175 Cytochrome b2, mitochondrial; L-lactate dehydrogenase [Cytochrome]; L-lactate ferricytochrome C oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P00175 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Saccharomyces cerevisiae
PFams: Cyt-b5, FMN_dh, Glu_synthase
591 amino acids: PaperBLAST, CDD, Compare to cluster

W1QKE8 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta
PFams: Cyt-b5, FMN_dh, Glu_synthase
558 amino acids: PaperBLAST, CDD, Compare to cluster