PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.2.4

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Found 9 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 484-587 amino acids (not heteromeric)

Q94AX4 glycolate dehydrogenase / D-lactate dehydrogenase (EC 1.1.99.14; EC 1.1.2.4) from Arabidopsis thaliana
DLD_ARATH / Q94AX4 D-lactate dehydrogenase [cytochrome], mitochondrial; AtD-LDH; D-lactate ferricytochrome C oxidoreductase; Glycolate dehydrogenase; EC 1.1.2.4 from Arabidopsis thaliana (Mouse-ear cress)
Q94AX4 D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) from Arabidopsis thaliana
PFams: FAD_binding_4, FAD-oxidase_C
567 amino acids: PaperBLAST, CDD, Compare to cluster

W1QLN6 D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) from Ogataea angusta
PFams: FAD_binding_4, FAD-oxidase_C
564 amino acids: PaperBLAST, CDD, Compare to cluster

LDHD_DANRE / F1QXM5 Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Danio rerio (Zebrafish) (Brachydanio rerio)
PFams: FAD_binding_4, FAD-oxidase_C
497 amino acids: PaperBLAST, CDD, Compare to cluster

DLD1_YEAST / P32891 D-lactate dehydrogenase [cytochrome] 1, mitochondrial; D-lactate ferricytochrome C oxidoreductase; D-LCR; EC 1.1.2.4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: FAD_binding_4, FAD-oxidase_C
587 amino acids: PaperBLAST, CDD, Compare to cluster

LDHD_MOUSE / Q7TNG8 Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Mus musculus (Mouse)
PFams: FAD_binding_4, FAD-oxidase_C
484 amino acids: PaperBLAST, CDD, Compare to cluster

Q86WU2 mitochondrial D-lactate dehydrogenase (EC 1.1.2.4) from Homo sapiens
LDHD_HUMAN / Q86WU2 Probable D-lactate dehydrogenase, mitochondrial; DLD; Lactate dehydrogenase D; EC 1.1.2.4 from Homo sapiens (Human)
Q86WU2 D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) from Homo sapiens
PFams: FAD_binding_4, FAD-oxidase_C
507 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 496-530 amino acids (not heteromeric)

DLD3_YEAST / P39976 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD3; D-2HG--pyruvate transhydrogenase DLD3; (R)-2-hydroxyglutarate--pyruvate transhydrogenase; D-lactate dehydrogenase [cytochrome] 3; D-lactate ferricytochrome C oxidoreductase; D-LCR; EC 1.1.99.40; EC 1.1.2.4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P39976 (R)-2-hydroxyglutarate-pyruvate transhydrogenase (EC 1.1.99.40) from Saccharomyces cerevisiae
PFams: FAD_binding_4, FAD-oxidase_C
496 amino acids: PaperBLAST, CDD, Compare to cluster

DLD2_YEAST / P46681 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD2; D-2HG--pyruvate transhydrogenase DLD2; Actin-interacting protein 2; D-lactate dehydrogenase [cytochrome] 2, mitochondrial; D-lactate ferricytochrome C oxidoreductase; D-LCR; EC 1.1.99.40; EC 1.1.2.4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: FAD_binding_4, FAD-oxidase_C
530 amino acids: PaperBLAST, CDD, Compare to cluster

YN53_SCHPO / Q9C1X2 Putative D-lactate dehydrogenase C713.03, mitochondrial; EC 1.1.2.4 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: FAD_binding_4, FAD-oxidase_C
526 amino acids: PaperBLAST, CDD, Compare to cluster