PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.2.8 as complete word(s)

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Found 12 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 3 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 595-742 amino acids (not heteromeric)

C7G3B7 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: PQQ_2, PQQ, PQQ_2, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
742 amino acids: PaperBLAST, CDD, Compare to cluster

C9K501 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: PQQ_2, PQQ, PQQ_2, PQQ, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
742 amino acids: PaperBLAST, CDD, Compare to cluster

D2SZY4 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: PQQ_2, PQQ, PQQ, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
742 amino acids: PaperBLAST, CDD, Compare to cluster

Q9Z4J7 alcohol dehydrogenase (cytochrome c550) monomer (EC 1.1.2.8) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
EXAA_PSEAE / Q9Z4J7 Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein ethanol dehydrogenase; QEDH; EC 1.1.2.8 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9Z4J7 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas aeruginosa
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, PQQ
623 amino acids: PaperBLAST, CDD, Compare to cluster

B1N7J0 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida
GI|150014701 quinoprotein phenylethanol dehydrogenase; EC 1.1.-.- from Pseudomonas putida
PFams: PQQ_3, PQQ_2, PQQ, PQQ_3, PQQ_2, PQQ_3, PQQ
634 amino acids: PaperBLAST, CDD, Compare to cluster

B1N7J5 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida
GI|150014706 quinoprotein decanol dehydrogenase; EC 1.1.-.- from Pseudomonas putida
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, PQQ
595 amino acids: PaperBLAST, CDD, Compare to cluster

QEDH_PSEPU / A8R3S4 Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); Quinoprotein alcohol dehydrogenase ADH I; ADH I; Quinoprotein ethanol dehydrogenase; QEDH; EC 1.1.2.8 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: PQQ_2, PQQ, PQQ, PQQ_2, PQQ_3, PQQ
623 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 472-472 amino acids (not heteromeric)

C7G3B8 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, Compare to cluster

C9K502 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, Compare to cluster

D2SZY5 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
PFams: Cytochrom_C, Cytochrom_C, Cytochrome_CBB3
472 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 205-205 amino acids (not heteromeric)

C9K504 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
205 amino acids: PaperBLAST, CDD, Compare to cluster

C9W9E3 alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus
205 amino acids: PaperBLAST, CDD, Compare to cluster