PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.3.15 as complete word(s)

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Found 28 characterized proteins with matching descriptions. 12 of these are heteromeric.

Fetched 28 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 27 of these sequences

Found 4 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 351-431 amino acids (not heteromeric)

A9QH69 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae
PFams: FMN_dh
390 amino acids: PaperBLAST, CDD, Compare to cluster

A9QH71 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Streptococcus iniae
PFams: FMN_dh, FMN_dh
407 amino acids: PaperBLAST, CDD, Compare to cluster

B7FUG8 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Phaeodactylum tricornutum
PFams: FMN_dh, IMPDH, Glu_synthase
431 amino acids: PaperBLAST, CDD, Compare to cluster

HAOX2_RAT / Q07523 Hydroxyacid oxidase 2; HAOX2; (S)-2-hydroxy-acid oxidase, peroxisomal; Long chain alpha-hydroxy acid oxidase; Long-chain L-2-hydroxy acid oxidase; EC 1.1.3.15 from Rattus norvegicus (Rat)
Q07523 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Rattus norvegicus
PFams: FMN_dh, Glu_synthase
353 amino acids: PaperBLAST, CDD, Compare to cluster

Q24JJ8 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Arabidopsis thaliana
PFams: FMN_dh, IMPDH, NMO, Glu_synthase
363 amino acids: PaperBLAST, CDD, Compare to cluster

Q9CG58 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Lactococcus lactis
PFams: FMN_dh
383 amino acids: PaperBLAST, CDD, Compare to cluster

Q9LJH5 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Arabidopsis thaliana
PFams: FMN_dh, IMPDH, NMO
363 amino acids: PaperBLAST, CDD, Compare to cluster

Q9LRR9 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Arabidopsis thaliana
PFams: FMN_dh, IMPDH
367 amino acids: PaperBLAST, CDD, Compare to cluster

Q9NYQ2 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Mus musculus
PFams: FMN_dh, Glu_synthase
353 amino acids: PaperBLAST, CDD, Compare to cluster

Q9NYQ3 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Homo sapiens
PFams: FMN_dh, Glu_synthase
351 amino acids: PaperBLAST, CDD, Compare to cluster

HAOX1_HUMAN / Q9UJM8 Hydroxyacid oxidase 1; HAOX1; Glycolate oxidase; GOX; EC 1.1.3.15 from Homo sapiens (Human)
Q9UJM8 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Homo sapiens
PFams: FMN_dh
370 amino acids: PaperBLAST, CDD, Compare to cluster

HAOX1_MOUSE / Q9WU19 Hydroxyacid oxidase 1; HAOX1; Glycolate oxidase; GOX; EC 1.1.3.15 from Mus musculus (Mouse)
Q9WU19 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) from Mus musculus
PFams: FMN_dh, Glu_synthase
370 amino acids: PaperBLAST, CDD, Compare to cluster

GOX_SPIOL / P05414 Peroxisomal (S)-2-hydroxy-acid oxidase; Glycolate oxidase; GOX; Short chain alpha-hydroxy acid oxidase; EC 1.1.3.15 from Spinacia oleracea (Spinach)
PFams: FMN_dh
369 amino acids: PaperBLAST, CDD, Compare to cluster

GLO1_ORYSJ / Q10CE4 Peroxisomal (S)-2-hydroxy-acid oxidase GLO1; Glycolate oxidase 1; GOX 1; OsGLO1; Short chain alpha-hydroxy acid oxidase GLO1; EC 1.1.3.15 from Oryza sativa subsp. japonica (Rice)
PFams: FMN_dh
369 amino acids: PaperBLAST, CDD, Compare to cluster

GLO4_ORYSJ / Q8H3I4 Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; Glycolate oxidase 4; GOX 4; OsGLO4; Short chain alpha-hydroxy acid oxidase GLO4; EC 1.1.3.15 from Oryza sativa subsp. japonica (Rice)
PFams: FMN_dh, IMPDH, Dus
366 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 405-444 amino acids (heteromeric)

RR42_RS17315 D-lactate oxidase, iron-sulfur subunit (EC 1.1.3.15) from Cupriavidus basilensis 4G11
PFams: Fer4_17, Fer4_4, Fer4_7, Fer4_8, Fer4_4, CCG, CCG
Heteromeric, 421 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c29700 D-lactate oxidase, iron-sulfur subunit (EC 1.1.3.15) from Phaeobacter inhibens BS107
PFams: Fer4_8, Fer4_10, Fer4_4, Fer4_7, Fer4_17, Fer4_4, CCG, CCG
Heteromeric, 444 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00926 D-lactate oxidase, iron-sulfur subunit (EC 1.1.3.15) from Sinorhizobium meliloti 1021
PFams: Fer4_8, Fer4_10, Fer4_17, Fer4_4, Fer4_7, CCG, CCG
Heteromeric, 443 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3839 D-lactate oxidase and glycolate oxidase, iron-sulfur subunit (EC 1.1.3.15) from Pseudomonas stutzeri RCH2
PFams: Fer4_8, Fer4_7, Fer4_17, CCG, CCG
Heteromeric, 405 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 479-499 amino acids (heteromeric)

RR42_RS17300 D-lactate oxidase, FAD-linked subunit (EC 1.1.3.15) from Cupriavidus basilensis 4G11
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 497 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c29720 D-lactate oxidase, FAD-linked subunit (EC 1.1.3.15) from Phaeobacter inhibens BS107
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 482 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00832 D-lactate oxidase, FAD-linked subunit (EC 1.1.3.15) from Sinorhizobium meliloti 1021
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 479 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3841 D-lactate oxidase and glycolate oxidase, FAD-linked subunit (EC 1.1.3.15) from Pseudomonas stutzeri RCH2
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 499 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 353-405 amino acids (heteromeric)

RR42_RS17310 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Cupriavidus basilensis 4G11
PFams: FAD_binding_4
Heteromeric, 374 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c29710 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Phaeobacter inhibens BS107
PFams: FAD_binding_4
Heteromeric, 366 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00833 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Sinorhizobium meliloti 1021
PFams: FAD_binding_4
Heteromeric, 405 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3840 D-lactate oxidase and glycolate oxidase, FAD binding subunit (EC 1.1.3.15) from Pseudomonas stutzeri RCH2
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 353 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

PP_4493 2-hydroxyglutarate oxidase (EC 1.1.3.15) from Pseudomonas putida KT2440
PFams: FAD_binding_4, FAD-oxidase_C, Fer4_8
1006 amino acids: PaperBLAST, CDD