PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.3.2 as complete word(s)

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Found 6 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 365-403 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A9QH69 (S)-2-hydroxy-acid oxidase (EC 1.1.3.15); L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae
PFams: FMN_dh
390 amino acids: PaperBLAST, CDD, Compare to cluster

D4YFM2 lactate oxidase monomer (EC 1.1.3.2) from Aerococcus viridans ATCC 11563
D4YFM2 L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans
PFams: FMN_dh
374 amino acids: PaperBLAST, CDD, Compare to cluster

F8WQN2 L-lactate oxidase (EC 1.1.3.2) from Chlamydomonas reinhardtii
PFams: FMN_dh, IMPDH
384 amino acids: PaperBLAST, CDD, Compare to cluster

Q44467 L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans
PFams: FMN_dh
374 amino acids: PaperBLAST, CDD, Compare to cluster

Q8Z0C8 L-lactate oxidase (EC 1.1.3.2) from Nostoc sp. PCC 7120
PFams: FMN_dh
365 amino acids: PaperBLAST, CDD, Compare to cluster

LA2M_STRIN / O33655 Lactate 2-monooxygenase; Lactate oxidase; EC 1.13.12.4 from Streptococcus iniae (Streptococcus shiloi)
O33655 L-lactate oxidase (EC 1.1.3.2) from Streptococcus iniae
PFams: FMN_dh
403 amino acids: PaperBLAST, CDD, Compare to cluster