PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.1.99.14 as complete word(s)

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Found 6 characterized proteins with matching descriptions. 3 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 492-499 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

Q55124 glycolate dehydrogenase (EC 1.1.99.14) from Synechocystis sp. PCC 6803
PFams: FAD_binding_4, FAD-oxidase_C
492 amino acids: PaperBLAST, CDD, Compare to cluster

b2979 glycolate dehydrogenase, putative FAD-linked subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655
GLCD_ECOLI / P0AEP9 Glycolate oxidase subunit GlcD; Glycolate dehydrogenase subunit GlcD; EC 1.1.99.14 from Escherichia coli (strain K12)
P0AEP9 glycolate dehydrogenase, putative FAD-linked subunit (EC 1.1.99.14) from Escherichia coli (strain K12)
RF|NP_417453 glycolate oxidase subunit glcD from Escherichia coli K12
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 499 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (2/4 heteromeric)

P74033 glycolate dehydrogenase (EC 1.1.99.14) from Synechocystis sp. PCC 6803
PFams: FAD_binding_4
439 amino acids: PaperBLAST, CDD

DLD_ARATH / Q94AX4 D-lactate dehydrogenase [cytochrome], mitochondrial; AtD-LDH; D-lactate ferricytochrome C oxidoreductase; Glycolate dehydrogenase; EC 1.1.2.4 from Arabidopsis thaliana (Mouse-ear cress)
Q94AX4 D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) from Arabidopsis thaliana
Q94AX4 glycolate dehydrogenase / D-lactate dehydrogenase (EC 1.1.99.14; EC 1.1.2.4) from Arabidopsis thaliana
PFams: FAD_binding_4, FAD-oxidase_C
567 amino acids: PaperBLAST, CDD

b4467 glycolate dehydrogenase, putative iron-sulfur subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655
GLCF_ECOLI / P52074 Glycolate oxidase iron-sulfur subunit; Glycolate dehydrogenase subunit GlcF; Glycolate oxidase subunit GlcF; EC 1.1.99.14 from Escherichia coli (strain K12)
P52074 glycolate dehydrogenase, putative iron-sulfur subunit (EC 1.1.99.14) from Escherichia coli (strain K12)
RF|YP_026190.1 glycolate oxidase, iron-sulfur subunit from Escherichia coli K12
PFams: Fer4_8, Fer4_17, Fer4_4, Fer4_7, Fer4_4, CCG, CCG
Heteromeric, 407 amino acids: PaperBLAST, CDD

b4468 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655
GLCE_ECOLI / P52073 Glycolate oxidase subunit GlcE; Glycolate dehydrogenase subunit GlcE; EC 1.1.99.14 from Escherichia coli (strain K12)
P52073 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli (strain K12)
RF|YP_026191.1 glycolate oxidase, subunit glcE from Escherichia coli K12
PFams: FAD_binding_4
Heteromeric, 350 amino acids: PaperBLAST, CDD